Sulfuricaulis limicola: SCL_0859
Help
Entry
SCL_0859 CDS
T05241
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCL_0859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_0859
Enzymes [BR:
slim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SCL_0859
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCL_0859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
BAV33179
UniProt:
A0A1B4XEE8
LinkDB
All DBs
Position
854702..855451
Genome browser
AA seq
249 aa
AA seq
DB search
MNVQNEMRRRQYLDALGITRWEPRQAPASVSPEIRVGTETPAVPSRSVPGPVLIREADTA
VDNSRDWTELEAEVRACTQCSLHKTRTQTVFGVGHRHASWMFIGEAPGADEDRQGEPFVG
RAGQLLNAILFAMGLKREEVYIANVLKCRPPGNRDPQPEEVTQCEPYLIRQIGLIRPKLI
VALGRHAAHSLLKTEVPLAKLRGQKLSYHGTPLFVTYHPAYLLRNPADKRKVWDDLCRAK
AAMTNLEES
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccagaatgagatgcgtcgccggcagtatctcgacgcgctcggcatcacgcgc
tgggagccgcgacaggcgccggcttccgtttctccggaaatccgcgtcggaacggaaaca
cccgccgtcccgtcgcgttccgtccccggaccggttctcatccgggaagcggacaccgcg
gtcgacaactcccgcgactggacggaactggaagcggaagtgcgcgcgtgcacccaatgt
tccctgcacaagacgcgcacccagacggtcttcggcgtcggtcaccggcacgcttcttgg
atgttcatcggcgaggccccgggcgcggacgaggaccggcagggcgagccgttcgtgggc
agggccggccagctgctgaatgcgatcctgtttgccatgggtctgaagcgcgaggaggtc
tacatcgccaacgtgctcaagtgccggccgccgggaaaccgcgacccgcagccggaggag
gtcacgcagtgtgagccttatctcatccgtcagatcggattgatccggccgaaactcatc
gtggcgctcggacggcatgcggcgcacagcctgctcaagaccgaggtcccgctggcgaaa
ctgcgcgggcaaaagctgtcctatcatggcacgccactgttcgtgacctaccatccggcc
tacctgctgcgtaacccggccgacaagcgcaaggtgtgggatgatctgtgccgcgccaag
gccgccatgacgaatctggaggagtcatga
DBGET
integrated database retrieval system
