Sulfuricaulis limicola: SCL_0927
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Entry
SCL_0927 CDS
T05241
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slim02044
]
SCL_0927
02035 Bacterial motility proteins [BR:
slim02035
]
SCL_0927
Secretion system [BR:
slim02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SCL_0927
Bacterial motility proteins [BR:
slim02035
]
Pilus system
Pilus assembly proteins
SCL_0927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
VWA_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
BAV33244
UniProt:
A0A1B4XEL3
LinkDB
All DBs
Position
complement(924109..927969)
Genome browser
AA seq
1286 aa
AA seq
DB search
MTTHRKHFNHLFCVLLSGALVALSGILPASAKDTDVYLMAPTVARDDSPNVLLIIDNSIS
MDAIITSAPAYNSSVDYCSATAVDAIVSGASSGIPSSCATYSGRVYWSFNSSAPALTSNS
WFAATKNHCEQSKTSLNGSSGQYGNNRVAGLITSGTSYNWASIRNKTDSDITFIDCQPDG
SNSDGYPKKNPVAANTVAGAYTNGGTSQRFDWTTFNTDHRPTLYSANYLAYASNAMLQQD
ITRLDVAKATLKDLIDSNPGIRFGLMAFNNNNNTPHGGRVLMRVDTMDDARRTTMKNIID
SLGPDTTTPLAETMWEAYRYYAGLTATYGNPSSSMTPNQDSCAQNVTSSYCNDGKLYRAT
NGQYSNSSGAILSGGTTDTTYNDGTYISPFKYGCQTGYIIYVTDGDPTNDEAADTTIDAL
SGIGTPTIVDYYAGTGFASANHKSRLSVLAEWMSKNDVYSGLPLDQKITTFTIGFGTGIS
VPGKALLQETATKSGGKYSDAVDASSLSSALKGALAEVWNETTSFVAPSLSINAFNKLYN
RDDVYFALFQPTSTVRWDGNLKKLKLCNGKETPACTFGEVIDKDNIAAINTSTSKIKDTS
ISYWGTTADGSDVNKGGAGAKITQNSEVPRALYTYTGSYASASMPATPVAIEAATTLGGS
STNTIRNAAVANPAILGLPSTATATEVDKLINWMRGQDAYDKDNDGNTTETRSWNFADPL
HSRPVAFTYGAVTTLGVVDKNNPIIKIFISTNDGTVRIINDDDGTEEWAFIPNELLSQQY
ALSQNADGGHIYGLDDSPTFMVTDVNNDGIIDYAAGDRVYMYIGMRRGGRNLYAFDVSPT
SPTKLTSHSDTVTPKLLWVIQGGTGDFAKLGQTWSRPKVVRIRAKCTGSVCDDSNPATDD
SESRMVLIFGGGYDTIQDNSLPAGPDSMGNAIYIVDPFTGSRIWWASSAAGANLVLSDMQ
YSIPSEITTIDTNGDKSVDRLYVGDVSGQVWRIDLGDQIGAASNDGSKGFVFADVTCSRN
ASNVRDCSAVTKQNWRKFFYPPDVAMVKDAAYSTDTNYDLVAIGSGDREDPLDLLTSNSS
PVAEAVHNRIYAFRDYDYKTGAPASMLLTTPTTPFAITHSVMYDATSNNLGTMTGATLQT
EINTNVKNSKGWFFDLKELSAVALNNGLTTQWVGEKVLAKPVIFDGVLFFTTFIPANVST
AQNTCQANEGEGRYYEVNYLTGSPVYNLAGDSTLDRYAFAGGGIPSEVIIVIRDGGVTGL
VGTSGGAKQVDPGSGSNRYKTFWWDE
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacatcgcaaacactttaatcaccttttctgcgttctgttaagcggcgcgctg
gtcgcactgtctgggattctgcccgccagcgccaaggacacggatgtgtatctcatggcg
cctacggtggcgcgcgacgattccccgaacgtcctgctcattatcgacaattcgataagc
atggacgcgatcatcacatcggcgcccgcgtacaattcttccgtcgactactgcagcgcc
accgctgtcgatgccattgtcagcggcgccagcagcggaataccgagcagctgcgccacc
tacagcggtcgcgtttactggtcgttcaacagcagcgcgccagcgctgacctccaacagc
tggtttgcggcgaccaaaaaccactgcgaacaatccaaaacaagcctgaatggatcctcc
gggcaatatggcaacaatagagtcgcgggtttgattacctcgggaacaagttacaactgg
gccagcatcaggaacaaaaccgacagtgatattaccttcattgactgtcagcctgacggc
agtaactcggacggttatcccaaaaagaatcccgtcgccgccaacacggttgctggcgct
tacaccaatggcggcacaagccaacggttcgattggacgacgttcaatacggaccatcgc
ccaacgctctacagcgccaattatctggcctacgccagtaacgcgatgttgcaacaggac
atcacccgcctcgatgtggccaaagccacgttaaaggatctcattgattccaatcccggt
atccggttcggtttgatggcgttcaacaataacaataacactccgcatggtggtcgagtc
ttgatgcgggtcgacaccatggacgatgcgcgccgcacaaccatgaaaaacatcatcgat
agcctggggcctgataccaccacacccctggcagagaccatgtgggaagcctatcgctat
tacgccggcctcacggcgacctatggtaatccttcgtcaagcatgacgccaaaccaggat
tcctgtgcgcagaacgtcacgagcagctattgcaacgacggaaaactctaccgtgccacc
aacggccagtacagcaacagcagcggagctatcctgtccggaggcactaccgatacaacc
tataacgacggcacctatatctctccattcaaatacggttgccaaacgggctatatcatt
tacgtcacggacggtgacccgacgaatgacgaagccgccgatacgactatcgatgccttg
tcgggtatcggaaccccgaccattgtggattactatgcgggcaccggcttcgcctcggcc
aaccacaagagcagattgtccgttctggcagaatggatgtccaaaaacgacgtttacagc
ggtctgccgctggaccagaagatcaccacttttaccatcggttttggcaccggcatttcg
gtcccaggcaaggccctgctgcaagaaacggccacgaagagcggcggaaaatacagtgac
gcagtggatgcttcctcgctttcaagcgcgctcaagggggcgctggcggaagtctggaat
gaaactacttccttcgttgcgcccagcttgtccatcaatgctttcaacaaactgtacaac
cgcgacgatgtctatttcgccctgtttcaacccaccagcacggtccgttgggatggcaat
ctcaaaaaactcaaattgtgcaacggcaaagaaacgccggcgtgcaccttcggcgaagtg
attgacaaagacaatattgccgcgatcaacacatcaaccagcaaaatcaaggacacgtcc
ataagctactggggaacaaccgcggatggctcggatgtcaacaagggcggcgcgggcgca
aaaatcacgcagaacagtgaagtgccgcgcgcgctgtatacctataccggctcatacgcc
agcgcgtccatgccggcaactccggtggcgatcgaggctgcaaccacgctcggcggctcg
tccaccaataccattcgtaatgccgctgtcgccaaccccgccattctgggtctgccctcc
acggcgacagccacggaagttgacaaattaattaactggatgcgcgggcaggatgcctat
gacaaggataacgacggcaatacgacggaaacccgttcgtggaactttgccgacccgctg
cacagccggcccgtagctttcacctatggcgccgtaactaccctcggggtcgtggacaag
aacaatcccattatcaaaatcttcatcagcaccaacgatggcacagtgcgcatcatcaat
gacgatgacgggacggaagaatgggcattcatccccaatgagctgttgagccaacagtac
gccctgtcgcagaacgcggatggcggccacatatatggcctggacgattcgcccaccttc
atggtcactgacgtgaataacgacggcatcattgattatgccgccggggacagggtgtat
atgtatatcggcatgcgccgtggcggacgcaacctctatgccttcgatgtatcgccgaca
tcgcccactaaactgaccagccacagcgacacggtcacgcccaaactgttgtgggtcata
cagggtggcacgggagacttcgccaagctggggcaaacctggtcgcgacccaaggtggtg
cgtattcgcgccaagtgcacgggcagcgtctgcgatgacagcaatccggcgacggacgac
agcgagtccagaatggtgctcattttcggcggaggctatgacaccattcaggacaacagc
ctgcctgcggggcctgacagcatgggcaacgcgatctacatcgtggatcctttcacggga
agtcgcatatggtgggccagcagcgccgccggcgccaatctggtattgtccgacatgcaa
tacagcatcccgtcagagataaccacgattgataccaacggcgataaatccgttgaccgc
ctgtacgtgggcgacgtcagcggccaggtctggcgcatcgacctgggagatcagatcggc
gccgccagtaatgacggatccaagggctttgtgtttgccgatgtcacctgttcccgaaac
gccagcaatgtgcgggattgcagcgccgtaaccaaacaaaattggcgcaagttcttctat
ccgccggatgtggcaatggtcaaggatgcggcttattcgaccgataccaattacgatctc
gtggccattggctcgggcgatcgtgaagatccgctggatttgcttacgtcaaatagcagt
ccggttgcggaagcggtgcataaccggatctacgccttccgggattacgactacaagacg
ggtgcgccggcttcgatgctgctgacaacaccgacgacgcccttcgcgattacacacagc
gtcatgtatgacgccacctcaaacaacctgggcaccatgacaggggcgacactgcaaact
gaaatcaatactaatgtcaaaaacagcaaaggttggttctttgacctcaaggaactcagc
gctgttgcgctgaacaatggcctcacgacccaatgggtgggcgagaaagtgctcgcaaag
ccggtcatcttcgacggcgtgctcttctttaccacctttataccggccaatgtcagcacg
gcgcagaatacctgccaagccaatgagggcgaaggtcgttattatgaagtcaattatctg
accggcagcccggtatataacctggctggcgatagcacgctcgatcggtacgcctttgcc
ggaggcggtatcccgtccgaagtaatcatcgtgattcgcgatggtggcgttaccggcctt
gtgggtaccagcggtggcgcgaaacaggtagatccaggcagcggatcaaaccgctacaag
actttctggtgggatgaatag
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