KEGG   Sulfuricaulis limicola: SCL_1160
Entry
SCL_1160          CDS       T05241                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
slim  Sulfuricaulis limicola
Pathway
slim02024  Quorum sensing
slim03060  Protein export
slim03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:slim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SCL_1160
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SCL_1160
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCL_1160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slim02044]
    SCL_1160
Enzymes [BR:slim01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SCL_1160
Secretion system [BR:slim02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SCL_1160
  Eukaryotic Sec-SRP protein
   SCL_1160
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin cobW AAA_16 AAA_30 AAA_33 T2SSE KTI12 AAA_24 NACHT AAA_19 SLFN-g3_helicase AAA_18 APS_kinase ATP_bind_1 KAP_NTPase NTPase_1 ATPase YqeC AAA_31 nSTAND3 AAA_14 Thymidylate_kin MobB ArsA_ATPase ResIII DnaB_C ATPase_2 ABC_tran SWI2_SNF2 TrwB_AAD_bind Viral_helicase1 PRK AAA_28 TsaE 6PF2K
Other DBs
NCBI-ProteinID: BAV33473
UniProt: A0A1B4XF83
LinkDB
Position
1170307..1171662
AA seq 451 aa
MFDNLSQRLQVTLKRLRGQGRLTEENTREALREVRMALLEADVALPVVKDFIEHVRVKAA
GQEVLASLTPGQALIKVVHDELVALMGAANEKLNLATRPPAVILVAGLQGSGKTTTVAKL
ARFLRERDNKSVMVVSADVYRPAAIEQLHKLAAAVGAEFFPSHPDQKPVDIARHAVEEAR
KRMMDVLIVDSAGRLHVDEPMMQEIRAVHAAIEPVETLFVVDSMTGQDAVNTARAFNEAL
PLTGVILTKTDGDARGGAALSIRQVTGKPIKFMGVGEKPAALEPFYPDRVAARILGMGDV
LGLVEQASQAADREKAQEFAQKLAKGKGFDLEDFRDQMLQMEKMGGLASLMEKLPGVGEV
SEAAKSQLGDRQVKRLVAIINSMTPAERSHPDTIRGSRKRRIAAGSGTQVQDVNRLLKQF
DQMQKVMKRMGKGGLQRMLRDVKGRLPGLPG
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttcgacaatttaagccagagattacaggtcaccctcaagcgcctgcgcgggcagggg
cggctcaccgaggaaaacacacgcgaggccctgcgcgaggtgcgcatggcgctgctcgaa
gccgacgtggcgctgccggtggtcaaggacttcatcgagcacgtgcgcgtcaaggccgcc
ggccaggaggtgctcgcgagcctgacgccgggacaggcgctgatcaaggtcgtgcacgac
gagctggtcgctctcatgggcgcggccaatgaaaaactcaacttggcgacccgcccgccc
gccgtgatcctggtggcgggcttgcagggctccggcaagaccacgaccgtggccaagctg
gcgcgcttcctgcgcgagcgcgacaacaaatccgtcatggtggtgagcgcggacgtctat
cgcccggcagccatcgaacagttgcacaaactggccgctgcggtgggcgcggaatttttc
cccagccatcccgaccagaagccggtggacatcgcgcgccacgccgtcgaggaggcgcgc
aagcgcatgatggacgtgctgatcgtcgacagcgccggccgcctgcacgtggacgagccg
atgatgcaggagatccgcgccgtgcacgcggcaattgaaccggtcgagacgctattcgtg
gtggacagcatgaccggccaggatgcggtgaacacggccagggccttcaacgaggcgctg
cctctcaccggcgtgatcctgaccaagaccgacggcgatgcgcgcggcggcgcggcgctc
tcgatccggcaggtgaccggcaagccgatcaagttcatgggcgtgggcgagaagcccgcc
gcgctggagccgttttatccggatcgcgtggccgcgcgcatcctcggcatgggcgacgtg
ctggggctggtggaacaggcgagccaggccgctgacagggaaaaggcgcaggaattcgcc
cagaagctcgccaaaggcaagggcttcgatctcgaggatttccgggatcagatgttacag
atggaaaaaatgggcggcttggccagcctcatggaaaaactgccgggtgttggcgaggtc
agcgaagcggccaagtcacaattgggtgaccggcaggtgaagcggctggtggccatcatc
aattccatgacgccggcggaacgcagccacccggacacgatccgcggttcgcgcaagcgg
cgcatcgccgccggttcgggcacgcaggtgcaggatgtcaatcgcctgctgaagcaattc
gatcagatgcagaaggtgatgaagcgcatgggcaagggcggattgcaacggatgttgcgc
gatgtcaaggggcgcttgccgggcttgcccggttga

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