Sulfuricaulis limicola: SCL_1176
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Entry
SCL_1176 CDS
T05241
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slim03032
]
SCL_1176
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_1176
Enzymes [BR:
slim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCL_1176
DNA replication proteins [BR:
slim03032
]
Prokaryotic type
DNA Topoisomerases
SCL_1176
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCL_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAV33489
UniProt:
A0A1B4XFB3
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All DBs
Position
1186904..1189459
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AA seq
851 aa
AA seq
DB search
MEQFAKETIPVNLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSMRYPIIDGQGNFGSVDGDAPAAM
RYTEIRMARMAHEMLADLDKETVDFSPNYDGSEHEPVVLPARVPNLLVNGSSGIAVGMAT
NIPPHNLNEVVNACVALIDNPDATIDDLMKHVPGPDFPTAGIITGVDGIHEAYRTGRGRV
YVRARVEIETDEKRGRQSIIVTELPYQVNKALLLERIAELVHDGKIEDIAELRDESDKSG
MRMVIDLKRGAVADVILNNLYEHTAMQSVFGINAVALVNGQPRLLNLKELIDAFLRHRRE
VVTRRSIYDLRKSRERAHILEGLAVALESIDEMIALIKAAKDPDEARVKMLARTWPAKMV
TKMLSAGDADLTRPEGLDKAFGLTPKGYRLTEVQAQAILDLRLHRLTGLEQEKLRSEYGD
ILKTIADLLDILGNPGRLMQVIRDELIAIREQYGDKRRTEIVQSRVSLSMEDLIADEDVV
VTLSHAGYIKSQPLAAYRAQRRGGRGKTATSMKEEDFVDKLLIANTHATILCFTSLGKVF
WKKVYEIPQAGRGARGKPIVNLLSLEEGEQISAILPVKDFDKGGYVFMATSDGTVKKTEL
VEFTRPRSTGIRAIELKPGNQLIGVGLTDGKCDILLFSNAGKVVRFGEDDVREMGRTARG
VRGLMLKPDQSVIALIISCPDQAGKAMTVLTATKNGYGKRTPLEDYPKHRRGGQGVISIQ
VNERNGPVVSACVVGDDDQAMLITSGGTMIRTRVKEISIVGRNTQGVRLIGTEEGEHLAG
LERVAESEEED
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattcgccaaagaaaccattccggtcaatctcgaagacgagatgcgccgctcc
tacctcgattacgccatgagcgtgatcgtgggccgggcgctgccggacgtgcgcgacggc
ctgaagccggtgcaccggcgcgtgctgttcgccatgcacgagctcggcaacgactggaac
aaggcctacaagaaatccgcgcgcgtggtcggtgacgtcatcggtaaataccacccccac
ggcgacaccgcggtgtacgacaccatcgtgcgcatggcgcaggacttctccatgcgctac
cccatcatcgacggccagggcaacttcggctcggtggacggcgacgccccggcggccatg
cgctacaccgaaatccgcatggcgcgcatggcgcacgagatgctggccgacctcgacaag
gaaaccgtcgatttctcgcccaactacgacggctcggagcacgagccggtggtgctgccg
gcgcgggtgccgaacctgctggtgaacggctcctccggcatcgccgtcggcatggcgacc
aacatcccgccgcacaacctgaacgaagtcgtcaacgcctgcgtcgcgctcatcgacaac
ccggacgcgaccatcgacgacctgatgaagcatgtgcccggcccggatttcccgacggcg
ggcatcatcaccggcgtcgacggcatccacgaggcctatcgcaccgggcgcgggcgcgtg
tacgtgcgcgcgcgggtggagatcgaaaccgacgagaagcgcgggcgccagtccatcatc
gtcaccgagctgccgtaccaggtgaacaaggcgctgctgctggaacgcatcgccgagctg
gtgcacgatggcaagatcgaggacatcgccgagctgcgcgacgagtcggacaagtccggc
atgcgcatggtgatcgacctcaagcgcggcgcggtcgccgacgtgatcctgaacaacctg
tacgaacacaccgcgatgcagagcgtgttcggcatcaatgcggtggcgctggtcaacggc
cagccgcgcctgctcaatctcaaggaactgatcgacgccttcctgcgccaccggcgcgag
gtggtcacgcggcgttcgatctatgacctgcgcaagtcgcgcgagcgcgcgcatattttg
gaaggcctggcggtcgcgctcgagagcatcgacgagatgatcgcgctcatcaaggccgcc
aaggacccggacgaggcgcgcgtgaaaatgctggcgcgcacatggccggcgaaaatggtg
accaagatgttgtccgcgggcgacgccgacctgacgcggccggaaggactggacaaggcc
ttcggcctgacgcccaagggctatcgcctgacggaagtgcaggcacaggcgattctcgac
ctgcggttgcaccgcctgaccgggctggagcaggaaaaactgcgcagtgaatacggcgac
attctcaaaaccattgctgacctgctcgacatcctcggcaatcccggacgcctgatgcag
gtcattcgcgacgagctgatcgcgatccgcgagcagtacggcgacaagcgtcgcaccgag
atcgtgcagagccgcgtgagcctcagcatggaagacctgatcgccgacgaggacgtggtc
gtgaccctgtcgcacgccggctacatcaagtcacaaccgctcgcggcctatcgcgcccag
cgccgcggcgggcgcggtaagaccgcgaccagcatgaaggaagaggatttcgtcgacaaa
ctgttgatcgccaacacccacgccacgatcctgtgtttcaccagcctgggcaaggttttc
tggaagaaggtgtacgagattccgcaggccgggcgcggcgcgcgcggtaagccgatcgtg
aacctgctgtcgctggaggagggcgagcagatcagcgccatcctgccggtgaaggacttc
gacaagggcggttatgtgttcatggccacctccgacggcacggtcaagaagaccgagttg
gtcgaattcacgcgcccgcgttccaccggcatccgcgcgatcgagttgaagcccggcaac
cagctgatcggcgtcggcctgaccgacggcaagtgtgacatattgctcttcagcaacgcc
ggcaaggtggtgcgcttcggggaagacgacgtgcgcgagatggggcggacggcgcgcggc
gtgcgcggcctcatgctgaaaccggaccagtcggtgatcgcgctgatcatctcttgcccg
gatcaggcgggcaaggccatgacggtgctgacggcgacgaagaacggttacggcaagcgt
acgccgctcgaggattacccgaaacaccgccgcggcggccagggcgtgatctcgatccag
gtgaacgagcgcaacggacccgtggtcagcgcctgcgtcgtcggcgacgacgatcaggcg
atgctgatcaccagtggcggcaccatgatccgcacgcgcgtgaaggaaatctccatcgtc
ggccgcaacacccagggcgtgcgtttgatcgggaccgaggaaggcgagcatctcgccggc
ctggaacgcgtggccgagtccgaggaagaagattaa
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