Sulfuricaulis limicola: SCL_1505
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Entry
SCL_1505 CDS
T05241
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
slim
Sulfuricaulis limicola
Pathway
slim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCL_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_1505
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCL_1505
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCL_1505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
UB2H
Cas3-like_C_2
DUF8810
Kinesin
Motif
Other DBs
NCBI-ProteinID:
BAV33811
UniProt:
A0A1B4XG86
LinkDB
All DBs
Position
complement(1509168..1511243)
Genome browser
AA seq
691 aa
AA seq
DB search
MSHRFELSSSFSPAGDQPQAITALVAGLAQGEACQTLLGVTGSGKTFTVANVIQQVQRPT
LVLAPNKTLAAQLYSEFRDFFPRNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINEQIE
QMRLSATKALLEREDVIIVATVSAIYGLGDVDAYHGMILHLRQGTAMSQRAILQRLTEMQ
YTRNDIELHRGTFRVHGDVIDIFPAESEKLALRVELFGDDIEALSEFDPLTGEVDNRPVR
FTIYPSSHYVTPRETIMGAIDQIKAELRERLEQLRSVDKLVEAQRLEQRTLYDLEMMREV
GYCSGIENYSRYLSGRKAGEPPPTLIDYLPKNALLVVDESHVTIPQLGGMYKGDRSRKET
LVEYGFRLPSALDNRPLRFDEFERLMPPAIFVSATPGPYELQRSQGVVVDQVVRPTGLID
PEVEVRPATAQVDDLLSEVRARTAAGERVLVTTLTKRMAEDLTEYFHEHDVRVRYLHSDI
ETIERAEIIRDLRAGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSTRSLIQTMG
RAARHINGKAMLYADRMTDSMRAAIDETGRRRLRQIAYNEEHGITPMGIIKAVKEIIEGV
TPAHPLYDTQGYGSKSAHAGHEFLRAAEEEAEYAAMAPRALAKLLDKLEKQMYAHARNLE
FEKAAAVRDRIHTIRSRKFGVIEGGGRKRGN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgattcgagctttccagttctttttcgcctgccggcgaccagccgcaggcg
attacggcgctggtcgcgggtctggcgcagggcgaagcctgtcagaccctgctgggcgtg
accggctccggcaagacctttaccgtcgccaatgtcatccagcaggtgcagcgtccgacg
ctggtgctggcgccgaacaagacgctggccgcgcagctctattccgagttccgcgatttc
ttcccgcgcaatgccgtggagtatttcgtctcgtactatgactactaccagcccgaggcc
tacgtcccgtcgtcggatacttatatagagaaggacgcctcgatcaacgagcagatcgag
caaatgcgtctgtcggccaccaaggccctgctcgagcgcgaggacgtcatcatcgtggcc
acggtgtcggccatttacggccttggcgacgtggacgcctaccacggcatgatcctgcac
ctgcgccagggcacggccatgtcccagcgcgccatcctgcagcgcctgacggaaatgcaa
tacacgcgtaacgacatcgagctccaccgcgggaccttccgggtgcacggggacgtcatc
gacatctttcccgccgagtcggaaaaactcgcgctgcgggtcgagctgttcggcgacgac
atcgaggcgctttcggaattcgatccgctgaccggcgaggtcgacaaccgcccggtgcgg
ttcaccatttatccgtcgtcgcattacgtcacaccgcgcgaaaccatcatgggcgcgatt
gatcagattaaagccgaattgcgcgagcgtctggagcaattgcgcagcgtggacaagctg
gtcgaagcgcagcggctggagcagcgcacgctttatgacctggagatgatgcgcgaagtg
ggttactgctccggcattgaaaattattcgcgctacctctccggacgcaaggccggtgaa
ccgccgccgacgctgatcgattaccttccgaaaaacgcgctgctggtcgtggacgagagc
catgtgaccattccccagctcggcggcatgtacaagggtgaccgctcgcgtaaggagacg
ctggtcgagtacggcttccgcctgccgtcggcgctggacaaccgcccgctgcgcttcgat
gaattcgagcgcctgatgccgccggcgattttcgtttcggcgacgcccgggccgtacgag
ttgcagcgatcgcagggcgtggttgtcgaccaggtggtgcggcccaccggcctgatcgat
cccgaagtcgaggtgcggccggcgacggcgcaggtggatgatctgctgtccgaggtgcgc
gcgcgcaccgccgccggcgaacgcgtgctggtcaccacgctgaccaagcgcatggcggag
gacctgacggaatatttccacgagcatgacgtgcgcgtgcgttacctgcactcggacatc
gaaaccatcgagcgcgccgagatcatccgtgacctgcgcgccggtgttttcgacgtgttg
atcggcatcaacctgttgcgagagggcctggatatcccggaggtgtcgctggttgccatc
ctcgatgccgacaaggagggattcctgcgctcaacgcgttcgctgatccagaccatgggc
cgcgccgcgcgtcacatcaacggcaaggccatgctttatgccgaccgcatgacggattcc
atgcgtgcggccatcgacgagaccggacggcgccgcctgcgacagattgcctataacgaa
gagcacggcattacgcccatgggcatcatcaaggcggtcaaggagatcatcgagggcgtg
acaccggcgcaccccctctatgacacccagggctatggctcgaaatccgcacatgccggg
cacgagttcctgcgcgccgccgaggaggaggccgaatacgccgccatggcgccccgggca
ctggccaagctgctcgacaagctggaaaagcagatgtacgcccatgcgcgcaacctggag
ttcgaaaaggcggcggcagtgcgcgaccggatccacacgatccgctcgcgcaaattcggc
gtgatcgagggcgggggccggaagcgcggcaactaa
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