Sulfuricaulis limicola: SCL_2043
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Entry
SCL_2043 CDS
T05241
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slim
Sulfuricaulis limicola
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slim03016
]
SCL_2043
Enzymes [BR:
slim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCL_2043
Transfer RNA biogenesis [BR:
slim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCL_2043
Prokaryotic type
SCL_2043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
LPG_synthase_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BAV34334
UniProt:
A0A1B4XHR2
LinkDB
All DBs
Position
complement(2108023..2108940)
Genome browser
AA seq
305 aa
AA seq
DB search
MKRQRRHCDPLSGVMLLDKPVGLTSNQALQTVKHLLNACKGGHSGSLDPIATGLLPLFFG
EATKLTQFLLNADKRYWTVFRLGQSTTTYDSEGEVTATRPVGAGRRDIERALERFRGEIE
QVPPMYSAIKHQGEALYKLARAGVEIEREPRRITIHEIKLLSLENDLLTLEIACSKGTYV
RSLAHDLGEILGCGAHVVQLRRTGIGHVGIENAVPLERLQALETPVERARLLQPVDSVLH
ELPDVHLTPLAAHYLKQGQSVSTQHGFKPGWVRLYEGDTRFLGMGEVQDDGRVAPRRLLA
LGENP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcggcagcgtcgccattgtgatcccctgagcggagtgatgttgctcgacaagccg
gtgggcctgacctcgaaccaggcgctgcagacggtcaagcacctgctcaacgcctgcaag
ggcgggcattcgggcagcctcgaccccatcgccaccgggctgttgccgctgttcttcggc
gaggccaccaagctgacccagttcctgctcaacgccgacaagcgttactggacggttttc
cggctcgggcagagcaccaccacctacgacagcgagggcgaggtcacggccacgcgcccg
gtcggcgccggtcggcgcgacatcgagcgcgcgctggagcgttttcgcggcgagatcgaa
caggtgccgccgatgtattccgccatcaagcaccagggtgaggcgctctacaagctggcc
cgcgccggggtggagatcgagcgcgagccgcgccgcatcaccatccatgaaatcaagctg
ttaagcctcgaaaacgacctgctgacactggagattgcctgctccaagggcacctatgtg
cgcagcttggcgcacgacctgggcgagatcctgggctgcggggcgcatgtggtgcagttg
cgccgcaccggcatcggccacgtcggcatcgaaaatgccgtgccgctcgagcgtttgcag
gccctggagaccccggtggagcgcgcccggctgttgcagccggtggacagcgtgctgcac
gagctgccggacgtgcacctgacgccgctcgcggcccattacctgaaacaggggcaatcg
gtgtcgacccagcatggcttcaaacccggctgggtacggctgtacgagggcgacacgcgc
tttctcggcatgggggaagtgcaggacgacgggcgggtggcgccgcggcgcctgctggca
ctgggtgaaaatccctga
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