Sulfuricaulis limicola: SCL_2118
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Entry
SCL_2118 CDS
T05241
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim00900
Terpenoid backbone biosynthesis
slim01100
Metabolic pathways
slim01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SCL_2118
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slim01006
]
SCL_2118
Enzymes [BR:
slim01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SCL_2118
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SCL_2118
Prenyltransferases [BR:
slim01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SCL_2118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
BAV34407
UniProt:
A0A1B4XHX2
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All DBs
Position
2183936..2184829
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AA seq
297 aa
AA seq
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MSAFPEQLRRFQHRVEHALDACLPAAAQAPARLHEAMRYVTLNGGKRVRASLVYAAGQAV
GAPDAALDVPACAVELIHAYSLVHDDLPCMDDDDLRRGKPTCHKAYDEATALLAGDALQS
LAFEILARDPALTIGPARRLHMIMLLAGAAGSHGMAGGQAIDLASGGKTLTLAQLEDMHL
RKTGALIRASVLLGAHAREDVAAEKLAALENYSHAIGLAFQITDDILDVEGKAEMLGKNP
GMDRARGKSTYPQVLGLAEAKARAQVLQTQALESLAPLEDNGRVLARLAGFIIERRQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgctttccccgaacaactccggcgcttccagcaccgcgtcgaacacgcgctggac
gcgtgcctgcccgccgccgcacaggcgccggcgcgcctgcatgaagccatgcgctacgtc
acgctgaacggcggcaagcgcgtgcgcgccagcctggtttacgccgccggccaggccgtc
ggcgcgcccgacgcggcgctcgatgttccggcctgcgcggtggaactgattcacgcctac
tcgctggtgcacgacgatctgccgtgcatggatgatgacgacctgcgccgcggcaaaccg
acctgtcacaaggcctacgacgaggccaccgcgctgctggcgggcgacgccttgcaatcg
ctggccttcgaaattctggcgcgcgacccggcgctgacgatcggccccgcccggcgtctg
catatgatcatgttgctggcgggagccgccggctcgcacggcatggccggcggccaggcg
atcgacctcgcctccggcggcaagacgctgacgctggcacagctcgaggacatgcacctg
cgcaagaccggcgcgctgatccgcgcgtcagtcctgctcggcgcccatgcccgcgaagac
gtagcggcggaaaaactggcggcgctcgaaaactacagccatgccatcggcctggcgttc
cagatcaccgacgacatcctggatgtcgagggcaaggcggaaatgctcgggaaaaacccc
ggcatggaccgtgcgcgcggcaaatccacctatccgcaggtactcgggctcgcggaagcc
aaggcccgcgctcaggtactccagacgcaggctctcgaaagcctcgcgcctttggaggat
aatggccgcgtattggccaggttggccggattcattatcgaacgccgccaatga
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