Sulfuricaulis limicola: SCL_2202
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Entry
SCL_2202 CDS
T05241
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03030
DNA replication
slim03430
Mismatch repair
slim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCL_2202
03430 Mismatch repair
SCL_2202
03440 Homologous recombination
SCL_2202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slim03032
]
SCL_2202
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_2202
Enzymes [BR:
slim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCL_2202
DNA replication proteins [BR:
slim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCL_2202
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCL_2202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAV34491
UniProt:
A0A1B4XI56
LinkDB
All DBs
Position
complement(2261550..2262269)
Genome browser
AA seq
239 aa
AA seq
DB search
MSWLTRLFRPHVELPAGYAQRLDAWRELPAVSEKQALTQARFIVVDVETSGLDTRKDRLL
SIGACVVEAQRVCAGENYATILRRDEASARDNILIHGIGPQAQAAGRPPEESLMQFLEFT
GKHTLVAFHAGFDQAMLDRDLRETLGVRLPNPWLDLALLAPALVPGARLPHASLDDWLGY
FGLRAGARHRAVDDAFVTAELFLVLLARARARELSTVSMLHAVCEQQARLVPGGGAGGA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctcacgcgactcttccgtccccacgtcgaactgcctgcgggttacgcgcag
cgcctggacgcgtggcgtgaattgccggcggtcagcgaaaagcaggcgttgacgcaggcc
cggttcattgtcgtggacgtcgagacttcgggactcgatacgcgcaaggaccggctgctt
tccatcggcgcctgcgtcgtggaggcgcagcgggtctgcgcgggcgaaaattacgcaacc
attttgcggcgcgatgaggcgagcgcgcgcgacaacatcctgattcacggcatcggcccg
caggcgcaggccgcgggcaggccgccggaggaatcgctgatgcagtttcttgaattcacc
ggcaagcatacgctggtggcgtttcacgccggtttcgaccaggccatgctggaccgcgac
ctgcgcgaaacgctgggtgtgcggctgcccaatccctggctcgacctggcgctgctggcg
ccggcgctggtgccgggcgcgcgcctgccgcacgcgagcctggacgactggctcggttat
ttcggtttgcgcgcgggggcgcgccaccgcgcggtggacgacgccttcgtgaccgccgaa
ctttttctggtgttgctcgcgcgcgcccgcgcgcgcgagctcagtaccgtgagcatgctg
cacgccgtatgcgagcagcaggcaaggcttgttcccgggggcggggcgggaggggcatga
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