Sulfuricaulis limicola: SCL_2254
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Entry
SCL_2254 CDS
T05241
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCL_2254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_2254
Enzymes [BR:
slim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCL_2254
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCL_2254
RecFOR pathway proteins
SCL_2254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_16
AAA_22
TIP49
nSTAND3
AAA_14
DUF815
AAA_2
Rad17
IstB_IS21
NTPase_1
AAA_18
RNA_helicase
TsaE
NB-ARC
AAA_33
AAA_24
AAA_17
AAA_28
ABC_tran
NACHT
AAA_25
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
BAV34542
UniProt:
A0A1B4XIC0
LinkDB
All DBs
Position
complement(2308010..2309050)
Genome browser
AA seq
346 aa
AA seq
DB search
MIETDRLVSAHAVDTAEEAADIRRLRPARLAEYVGQEPIRRQMEIFIAAARGRSEALDHV
LLFGPPGLGKTTLAHIVANEMGVGLRQTSGPVLERPGDLAAILTNLQPNDVLFIDEIHRL
SPIVEEILYPAMEDYQLDILIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIV
QRLEFYNPEELARIVARSAGILEIPIEPDAVAAIARRSRGTPRIVNRLLRRARDFAQIKG
NGRLTGDIAELALSMLEVDQCGFDMLDRKLLLAVIEKFSGGPVGVDNLAAAIGEERDTIE
DVIEPFLIQQGYLMRTPRGRLATASAWRHFGLKAPSSPEQRGIFEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgattgagaccgaccgactggtatccgcgcacgcggtggacacggccgaggaagccgct
gacatccgccgtctgcgtcccgcgcgcctggcggaatacgtcggtcaggagccgatccgc
cggcagatggagattttcatcgccgccgcccgcgggcgcagcgaggccctggaccacgtg
ctgctgttcggcccgccgggcctcggcaagaccacgctggcccatatcgtagccaatgaa
atgggcgtggggctgcgccagacctcggggccggtgctggagcgtcccggcgacctggcg
gcgatcctgaccaacctgcaacccaacgacgtcctgttcatcgacgagattcaccggctg
agccccatcgtcgaggaaatcctctatcccgccatggaggactatcagcttgatatcctc
atcggcgagggcccggcggcgcgctccatcaagctcgacctgccgccgttcacgctcgtg
ggcgcgaccacgcgcgccgggctgctgacctcgccgttgcgcgaccgcttcggcatcgtg
caacgcctggagttttacaatccggaggaactggcccgcatcgttgcgcgttccgccggg
attctggagataccgatcgagcccgatgccgtggcggcgatcgcacggcgctcgcgcggc
accccgcgcatcgtcaaccgcctgttgcggcgcgcccgcgattttgcccagatcaaaggc
aacggacgcctgacgggcgacatcgccgaattggcgctcagcatgctagaagtggaccag
tgcggcttcgatatgctcgaccgcaagctgctgctggccgtgatcgaaaaattttccggc
ggcccggtgggggtggacaatctcgccgcggccataggcgaggagcgtgataccatcgag
gacgtgatcgagccgtttctgattcagcagggttatctcatgcgcacgccgcgcggtcgc
ctggccaccgcttcggcctggcggcacttcggcctcaaggcgccgagctcgccggagcag
cggggcatattcgaggaatga
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