KEGG   Sulfuricaulis limicola: SCL_2269
Entry
SCL_2269          CDS       T05241                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
slim  Sulfuricaulis limicola
Pathway
slim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCL_2269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slim03400]
    SCL_2269
DNA repair and recombination proteins [BR:slim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SCL_2269
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SCL_2269
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 AAA_21 RsgA_GTPase nSTAND3 AAA_25 DnaJ_CXXCXGXG BCA_ABC_TP_C Viral_helicase1
Other DBs
NCBI-ProteinID: BAV34557
UniProt: A0A1B4XID4
LinkDB
Position
2320463..2323321
AA seq 952 aa
METIRIRGARTHNLKNIDVDLPRDQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLALMEKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLYARVGEPRC
PEHGVTLKAQTVSQMVDHVMALPEDTKLMLLAPLVEDRKGEHLHILERLRAQGYIRARID
GTVVSLDEAPDLKKNFKHTIEAVVDRVVVRPGQEQRLAESFETAANLGEGLIRVVVLDEQ
NNSTQEIVFSARYACPHCGYSLAELEPRLFSFNNPAGACPGCDGLGVRQFFDPARVVSDP
TLSLPAGAIRGWDRRNAFYFHMLESLAKHYKFDLDAPFEKLPKKARDVILHGSGEELITF
TYFSEQGPRAKRKHAFEGVIPNIERRYRESESNSVREELAKFLSHQPCETCEGSRLKREA
RHVFVEGRALHEITRLPVEAALGFFQGLRLAGSRGEIAAKIVKEVANRLGFLVNVGLDYL
TLARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNARLLDTLRRLRDLG
NSVIVVEHDEEAIRAADFVLDIGPGAGVHGGEVVAQGTPADILRHPASITGAYLRGERKI
AVPARRTPNDPARQLVIRGATGNNLKDVDVSIPVGLFTCVTGVSGSGKSTLINDTLYASV
AKHLYGSALEPAPCRAIEGLEQFDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAATP
MARERGYAPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDIYVPCDVCRGKRYNRETLDIR
YKDKSIDEVLAMTVETAAEFFSAIPAVSHKLQTLLEVGLSYITLGQSATTLSGGEAQRIK
LARELSKRDTGRTLYILDEPTTGLHFHDIQQLLTVLNRLRDHGNTVVVIEHNLDVIKTAD
WLIDLGPEGGDGGGKILVTGTPEAVAGHPASHTGEFLKHLLERAAPPQRRAG
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggaaaccatccgcatccgcggcgcacgcacgcacaatctcaagaacatcgacgtcgac
ctgccgcgcgaccagctcatcgtcatcaccggactatccggctccggcaagtcctcgctt
gctttcgatacactttatgccgaaggtcaacgccgttacgtcgaatcgctgtcggcctac
gcgcgccagttcctggcgctcatggaaaagccggacgtggacctgatcgaaggcctgagc
ccggccatttccatcgagcagaaatccacctcgcacaacccgcgctccacggtcggcacc
gttaccgagatctacgactacctgcgcctgctgtacgcgcgcgtgggcgagccgcgctgc
ccggagcacggcgtgacgctcaaggcccagaccgtgagccagatggtggaccatgtcatg
gcgctgcccgaggacaccaagctcatgctgctggcgccgctggtcgaggaccgcaagggc
gagcacctgcacatcctggagcggctgcgcgcgcagggctatatccgcgcgcgcatcgac
ggcacggtggtttctctggatgaagcgccggacctcaagaagaacttcaagcacaccatc
gaggccgtggtggaccgcgtggtagtgcgtccgggacaggagcagcgtctggccgaatcc
ttcgaaaccgcggccaacctgggtgaaggcctgatccgcgtggtggtgctggacgaacaa
aacaacagcacgcaggaaatcgtattttccgcgcgctacgcctgcccgcactgcggctat
tcgcttgccgaactcgaaccgcggctgttctcattcaacaacccggccggggcctgtccc
ggctgcgacggtctcggcgtgcgccagttcttcgatcccgcgcgcgtggtcagcgacccc
acgctgtcgctgccggccggcgcgatccgcggctgggaccggcgcaacgcgttttacttt
cacatgctggaatcgctggcgaaacactacaagttcgatctcgatgcgccgttcgagaag
ctcccgaaaaaagcgcgcgacgtcatcctgcatggcagtggcgaagaactcatcaccttt
acctatttcagcgagcagggtccgcgcgccaaacgcaaacatgcctttgaaggcgtgatc
cccaatatcgaacgacgctatcgcgagtccgaatccaattccgtgcgcgaggaactggcg
aaattcctcagccatcagccgtgcgagacctgcgagggctcgcgcctgaaacgcgaggcg
cggcacgtgttcgtggaaggcagggcgctgcatgaaatcacccggctgccggtggaagcg
gcgctcggttttttccagggcctgcgcctggccggaagccgtggtgaaatcgcggccaag
atcgtgaaggaggtcgccaaccgcctcggcttcctggtaaacgtcggcctcgattacctg
acgctggcgcgttcggcggaaacactctccggcggcgaggcccagcgcatccgcctggcc
tcgcagatcggcgccggactggtcggcgtcatgtacgtgctcgacgagccttcgatcggc
ctgcaccagcgcgacaacgcgcgcctgctcgacacgctccggcgcctgcgcgatctgggc
aacagcgtgatcgtggtggagcacgacgaggaggcgattcgcgccgcggatttcgtgctc
gacatcggcccgggcgcaggcgtgcacggcggcgaggtcgtggcccagggcacgccggcg
gacatcctgcggcatcccgcttcgatcaccggcgcctacctgcgcggcgagcgcaagatc
gcggtcccggcgcgccgcacgcccaacgatccggcgcgccagctggtcatccgcggcgcc
accggcaacaacctgaaagacgtggatgtttcgattccggtggggctgttcacctgcgtc
accggcgtctcgggctcgggcaagtccacgctcatcaacgacaccctctacgcctcggtc
gccaaacatctgtacggctcggcgctcgaacccgccccttgccgcgccatcgaggggctc
gagcagttcgacaaggtcgtcgacatcgatcagtcgccgatcgggcgcaccccgcgctcc
aacccggcgacctataccgggctgttcaccccgatccgcgaactgttcgccgccaccccc
atggcgcgcgagcgcggctacgcgccggggcgcttctcgttcaacgtccgcggcggacgc
tgcgaggcctgccagggcgacggcctgatcaaggtggaaatgcatttcctgccggacatc
tacgtgccctgcgacgtgtgtcgcggcaagcgttacaaccgtgaaaccctcgacatccgc
tacaaggacaaaagcatcgacgaggtgctggccatgaccgtggaaacggcggcggagttt
ttcagcgccatcccggccgtgagccacaagctccagacgctgctcgaggtcggcctgtcc
tacatcaccctcggccagagcgccaccacgctctccggcggcgaggcgcagcgcatcaag
ctcgcgcgcgaactgtccaagcgcgataccggacgcacgctgtacatcctggacgagccg
accacggggctgcatttccacgacatccagcagttgctgacggtgctgaaccggctgcgc
gaccatggcaacaccgtggtcgtgatcgagcacaatctggacgtgatcaagaccgccgac
tggctgatcgacctgggccctgaaggcggcgacggcggcggaaaaattctcgtcaccggc
acgccggaggcagtggcggggcacccggcctcgcacaccggggagttcctgaaacacttg
ctggagcgcgccgcgccgccccaacgccgcgccggctag

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