Sulfuricaulis limicola: SCL_2269
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Entry
SCL_2269 CDS
T05241
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
slim
Sulfuricaulis limicola
Pathway
slim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCL_2269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_2269
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCL_2269
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCL_2269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
AAA_21
RsgA_GTPase
nSTAND3
AAA_25
DnaJ_CXXCXGXG
BCA_ABC_TP_C
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAV34557
UniProt:
A0A1B4XID4
LinkDB
All DBs
Position
2320463..2323321
Genome browser
AA seq
952 aa
AA seq
DB search
METIRIRGARTHNLKNIDVDLPRDQLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLALMEKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLYARVGEPRC
PEHGVTLKAQTVSQMVDHVMALPEDTKLMLLAPLVEDRKGEHLHILERLRAQGYIRARID
GTVVSLDEAPDLKKNFKHTIEAVVDRVVVRPGQEQRLAESFETAANLGEGLIRVVVLDEQ
NNSTQEIVFSARYACPHCGYSLAELEPRLFSFNNPAGACPGCDGLGVRQFFDPARVVSDP
TLSLPAGAIRGWDRRNAFYFHMLESLAKHYKFDLDAPFEKLPKKARDVILHGSGEELITF
TYFSEQGPRAKRKHAFEGVIPNIERRYRESESNSVREELAKFLSHQPCETCEGSRLKREA
RHVFVEGRALHEITRLPVEAALGFFQGLRLAGSRGEIAAKIVKEVANRLGFLVNVGLDYL
TLARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNARLLDTLRRLRDLG
NSVIVVEHDEEAIRAADFVLDIGPGAGVHGGEVVAQGTPADILRHPASITGAYLRGERKI
AVPARRTPNDPARQLVIRGATGNNLKDVDVSIPVGLFTCVTGVSGSGKSTLINDTLYASV
AKHLYGSALEPAPCRAIEGLEQFDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAATP
MARERGYAPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDIYVPCDVCRGKRYNRETLDIR
YKDKSIDEVLAMTVETAAEFFSAIPAVSHKLQTLLEVGLSYITLGQSATTLSGGEAQRIK
LARELSKRDTGRTLYILDEPTTGLHFHDIQQLLTVLNRLRDHGNTVVVIEHNLDVIKTAD
WLIDLGPEGGDGGGKILVTGTPEAVAGHPASHTGEFLKHLLERAAPPQRRAG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatccgcatccgcggcgcacgcacgcacaatctcaagaacatcgacgtcgac
ctgccgcgcgaccagctcatcgtcatcaccggactatccggctccggcaagtcctcgctt
gctttcgatacactttatgccgaaggtcaacgccgttacgtcgaatcgctgtcggcctac
gcgcgccagttcctggcgctcatggaaaagccggacgtggacctgatcgaaggcctgagc
ccggccatttccatcgagcagaaatccacctcgcacaacccgcgctccacggtcggcacc
gttaccgagatctacgactacctgcgcctgctgtacgcgcgcgtgggcgagccgcgctgc
ccggagcacggcgtgacgctcaaggcccagaccgtgagccagatggtggaccatgtcatg
gcgctgcccgaggacaccaagctcatgctgctggcgccgctggtcgaggaccgcaagggc
gagcacctgcacatcctggagcggctgcgcgcgcagggctatatccgcgcgcgcatcgac
ggcacggtggtttctctggatgaagcgccggacctcaagaagaacttcaagcacaccatc
gaggccgtggtggaccgcgtggtagtgcgtccgggacaggagcagcgtctggccgaatcc
ttcgaaaccgcggccaacctgggtgaaggcctgatccgcgtggtggtgctggacgaacaa
aacaacagcacgcaggaaatcgtattttccgcgcgctacgcctgcccgcactgcggctat
tcgcttgccgaactcgaaccgcggctgttctcattcaacaacccggccggggcctgtccc
ggctgcgacggtctcggcgtgcgccagttcttcgatcccgcgcgcgtggtcagcgacccc
acgctgtcgctgccggccggcgcgatccgcggctgggaccggcgcaacgcgttttacttt
cacatgctggaatcgctggcgaaacactacaagttcgatctcgatgcgccgttcgagaag
ctcccgaaaaaagcgcgcgacgtcatcctgcatggcagtggcgaagaactcatcaccttt
acctatttcagcgagcagggtccgcgcgccaaacgcaaacatgcctttgaaggcgtgatc
cccaatatcgaacgacgctatcgcgagtccgaatccaattccgtgcgcgaggaactggcg
aaattcctcagccatcagccgtgcgagacctgcgagggctcgcgcctgaaacgcgaggcg
cggcacgtgttcgtggaaggcagggcgctgcatgaaatcacccggctgccggtggaagcg
gcgctcggttttttccagggcctgcgcctggccggaagccgtggtgaaatcgcggccaag
atcgtgaaggaggtcgccaaccgcctcggcttcctggtaaacgtcggcctcgattacctg
acgctggcgcgttcggcggaaacactctccggcggcgaggcccagcgcatccgcctggcc
tcgcagatcggcgccggactggtcggcgtcatgtacgtgctcgacgagccttcgatcggc
ctgcaccagcgcgacaacgcgcgcctgctcgacacgctccggcgcctgcgcgatctgggc
aacagcgtgatcgtggtggagcacgacgaggaggcgattcgcgccgcggatttcgtgctc
gacatcggcccgggcgcaggcgtgcacggcggcgaggtcgtggcccagggcacgccggcg
gacatcctgcggcatcccgcttcgatcaccggcgcctacctgcgcggcgagcgcaagatc
gcggtcccggcgcgccgcacgcccaacgatccggcgcgccagctggtcatccgcggcgcc
accggcaacaacctgaaagacgtggatgtttcgattccggtggggctgttcacctgcgtc
accggcgtctcgggctcgggcaagtccacgctcatcaacgacaccctctacgcctcggtc
gccaaacatctgtacggctcggcgctcgaacccgccccttgccgcgccatcgaggggctc
gagcagttcgacaaggtcgtcgacatcgatcagtcgccgatcgggcgcaccccgcgctcc
aacccggcgacctataccgggctgttcaccccgatccgcgaactgttcgccgccaccccc
atggcgcgcgagcgcggctacgcgccggggcgcttctcgttcaacgtccgcggcggacgc
tgcgaggcctgccagggcgacggcctgatcaaggtggaaatgcatttcctgccggacatc
tacgtgccctgcgacgtgtgtcgcggcaagcgttacaaccgtgaaaccctcgacatccgc
tacaaggacaaaagcatcgacgaggtgctggccatgaccgtggaaacggcggcggagttt
ttcagcgccatcccggccgtgagccacaagctccagacgctgctcgaggtcggcctgtcc
tacatcaccctcggccagagcgccaccacgctctccggcggcgaggcgcagcgcatcaag
ctcgcgcgcgaactgtccaagcgcgataccggacgcacgctgtacatcctggacgagccg
accacggggctgcatttccacgacatccagcagttgctgacggtgctgaaccggctgcgc
gaccatggcaacaccgtggtcgtgatcgagcacaatctggacgtgatcaagaccgccgac
tggctgatcgacctgggccctgaaggcggcgacggcggcggaaaaattctcgtcaccggc
acgccggaggcagtggcggggcacccggcctcgcacaccggggagttcctgaaacacttg
ctggagcgcgccgcgccgccccaacgccgcgccggctag
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