Sulfuricaulis limicola: SCL_2678
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Entry
SCL_2678 CDS
T05241
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim00730
Thiamine metabolism
slim01100
Metabolic pathways
slim01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SCL_2678
Enzymes [BR:
slim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SCL_2678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAV34955
UniProt:
A0A1B4XJH4
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All DBs
Position
complement(2720750..2722639)
Genome browser
AA seq
629 aa
AA seq
DB search
MSANPKDFLQPASTLSHEAIRPFPASRKIYQQGSRPDLKVGMREVTLTPTPSSHGAEENP
PITVYDTSGPYTDPSAHIDLRAGLAALREPWILERNDTVQLDGPSSEYGRARARDPKLAH
LRFEHIRKPRRAKSGANVSQMHYARKGMITPEMEYIAIRETLRLNELRNDPRYTRLLRQH
RGNAFGAAIPEEITPEFVRDEVARGRAIIPNNINHPESEPMIIGRNFLVKINTNIGNSAV
SSSIEEEVEKMVWSVRWGGDTLMDLSTGKNIHETREWIIRNCPVPVGTVPIYQALEKVDG
KAEELTWEIYRDTLIEQAEQGVDYFTVHAGVRLPWIPLTAERVTGIVSRGGSIMAKWCLA
HHQESFLYTHFEDICEIMKAYDVAFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWQ
HDVQTMIEGPGHIPMQLIKENMDKELEDCFEAPFYTLGPLTTDIAPGYDHITSAIGAAQI
GWYGTAMLCYVTPKEHLGLPDKQDVRDGIIAYKIAAHAADLAKGHPGAQLRDNALSKARF
EFRWADQFNLGLDPEKAQEFHDETLPQEGAKLAHFCSMCGPHFCSMKITQEVRDYAASQK
LSEAEALQRGMEAKAVEFVKQGAEIYKKA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaaccccaaggattttctgcaaccggcttcgaccctgtcgcacgaggccatc
cgcccgttcccggcctcgcgcaagatttatcagcagggcagccgccccgacctgaaggtc
ggcatgcgcgaggtcacgctgaccccgacgccctcgagccacggcgccgaggagaacccg
ccgatcacggtgtacgacacctccggcccgtacaccgacccgagcgcccacatcgacctg
cgcgccggcctcgccgccctgcgcgagccgtggatcctggagcgcaacgacaccgtgcag
ctcgacggccccagctccgaatatggccgcgcccgcgcccgcgaccccaagctcgcgcac
ctgcgcttcgaacacatccgcaaaccgcgccgcgcgaagagcggggcgaacgtgtcgcag
atgcactacgcgcgcaaaggcatgatcacgcccgagatggaatacatcgccatccgcgag
accctgcggctgaatgaattgcgcaacgatccgcgctacacccggcttttgaggcagcat
cgcggcaatgccttcggcgccgccatccccgaggagatcacgcccgagttcgtgcgtgac
gaagtcgcgcgcgggcgcgccatcattcccaacaatatcaaccacccggaatccgagccg
atgatcatcggccgcaattttctggtgaagatcaacaccaatatcggcaactcggcggta
tcttcttccatcgaagaagaagtcgagaaaatggtgtggtcggtgcgctggggcggcgac
acgctcatggacctgtccacaggcaagaacatccacgagacgcgcgagtggatcatccgc
aactgcccggtgccggtcggcacggtgccgatctaccaggcgctggaaaaggtcgacggc
aaggccgaggaactcacctgggaaatctaccgcgacacgctcatcgagcaggccgagcag
ggcgtggattacttcacggtccacgccggcgtgcgcctgccgtggatcccgctcaccgcc
gagcgcgtcaccggcatcgtctcgcgcggcggctcgatcatggccaagtggtgcctcgcg
catcatcaggaaagcttcctctacacccacttcgaggacatctgcgagatcatgaaggcc
tacgacgtcgccttctcgctcggcgacggcctgcgccccggctcgatcgccgacgccaac
gaccgcgcccagttcgccgagctggaaacgctcggagaactcaccaagatcgcgtggcag
cacgacgtgcaaaccatgatcgaaggcccgggccacatcccgatgcagctgattaaagag
aacatggacaaggaactcgaagactgcttcgaggcgccgttctacacgctcgggccgctg
accaccgacatcgcgcccggctacgaccacatcacatccgccatcggcgcggcccagatc
ggctggtacggcaccgcgatgctgtgctacgtcacgcccaaggaacacctgggattgccc
gacaagcaggacgtgcgcgacgggattattgcctacaaaatcgccgcgcacgccgccgac
ctcgccaagggccaccccggcgcgcagctgcgcgacaacgcgctgtccaaggcgcgcttc
gaattccgctgggccgaccagttcaacctcggcctcgacccggaaaaggcgcaggaattc
cacgacgaaaccctgccgcaggaaggcgctaagctggcgcacttctgttccatgtgcggc
ccgcatttctgctccatgaagatcacgcaggaagtccgcgactacgccgccagccagaag
ctgtcggaagccgaggcgcttcagagaggtatggaagccaaggccgtggaattcgtgaag
cagggagcggagatttacaagaaggcctga
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