Streptococcus lingualis: SM123_00040
Help
Entry
SM123_00040 CDS
T10630
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slin Streptococcus lingualis
Pathway
slin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SM123_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slin03021
]
SM123_00040
03400 DNA repair and recombination proteins [BR:
slin03400
]
SM123_00040
Enzymes [BR:
slin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SM123_00040
Transcription machinery [BR:
slin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SM123_00040
DNA repair and recombination proteins [BR:
slin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SM123_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Corazonin
Motif
Other DBs
NCBI-ProteinID:
WPS46920
UniProt:
A0ABZ0ST91
LinkDB
All DBs
Position
complement(7184..8122)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKIDENKDYGVFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVL
HEFDTVPGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIVN
PDHYLFTIGEGASLKATLTVNSGRGYVPADQNKKDDAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTNLTEIAIATDVMKEVDT
TSDDRILERTIEELDLSVRSYNCLKRAGINTVYDLTEKSEAEMMKVRNLGRQSLEEVKIK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaatataacaaaaattgatgaaaacaaagattatggcgtg
tttgtcgtagaaccacttgaacgtggctatggtacaacacttggaaactcacttcgtcgt
gtacttctggcttcacttccaggtgcagctgtcacttcaatcaacattgaaggtgtactc
cacgaatttgataccgttccaggagtccgtgaagacgttatgcaaattattcttaacgtt
aaaggaatcgccgttaaatcttacgtccaagacgaaaagattattgaacttgatgtagaa
ggacctgcagaagtaactgctggagatattcttactgatagtgacatcgaaattgtaaac
cctgatcattatctatttacaatcggagaaggagcatctttgaaagcaacgcttactgta
aacagtggacgtggctatgttccggctgatcaaaacaaaaaagatgatgcaccagtggga
acacttgctgtagattcaatttatacgccagtgactaaagtcaattaccaagttgaacca
gcacgcgttggtagcaacgatggctttgacaagctaacccttgaaattttgacaaatggg
acaatcattccagaagatgcattaggtttgtctgctcgtattttgacagaacacctaaat
ctattcacaaacttaactgaaattgctattgcaacagatgttatgaaggaagtggataca
acttctgatgatcgcattttagaacgtacgatcgaagaattagatctttcagttcgttca
tataactgtttgaaacgtgctggcattaatactgtttacgatttgactgaaaaatcagaa
gcagaaatgatgaaagttcgtaacttgggacgtcagagtcttgaagaagttaaaatcaaa
cttgccgacttaggccttgggttaaaaaacgataaatag
DBGET
integrated database retrieval system
