Streptococcus lingualis: SM123_04345
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Entry
SM123_04345 CDS
T10630
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
slin Streptococcus lingualis
Pathway
slin03410
Base excision repair
slin03430
Mismatch repair
slin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SM123_04345 (recJ)
03430 Mismatch repair
SM123_04345 (recJ)
03440 Homologous recombination
SM123_04345 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slin03400
]
SM123_04345 (recJ)
DNA repair and recombination proteins [BR:
slin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SM123_04345 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SM123_04345 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SM123_04345 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
HTH_40
Toprim
Motif
Other DBs
NCBI-ProteinID:
WPS47721
UniProt:
A0ABZ0SZ74
LinkDB
All DBs
Position
929764..931989
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AA seq
741 aa
AA seq
DB search
MITSKYDWQLASPSADEAFLALAKKAGLEASVATLLYERGIQTKEDLEDFLEPKLEKLHD
PYLLHDMDKAVGRIRRAIEDYEQILIYGDYDADGMTSASIMKETLEQMGAEVQVYLPNRF
TDGYGPNESVYKYFIEQQGISLIVTVDNGVAGNQAIAMAQAMGVDVIVTDHHSMPEVLPD
AYAIIHPEHPDADYPFHYLAGCGVAFKLACALLEEVPVDLLDLVAIGTIADMVSLTDENR
ILVKYGLGVLQHTQRMGLQELLEIAGIRPEDVNEETVGFQIAPRLNALGRLDDPNPAIEL
LTGFDDEEAHEIALMIHQKNEERKEIVQAIYDEAKTMVDPSLSAQVLAKEGWNPGVLGIV
AGRLLEELHQPVVVLSIEDGRAKGSARSPESVNIFEALDPYRSLFVAFGGHAGAAGMTLE
VDQLPALSQALTDYIAEQEIDLSSKSSLAIDEELHLTELTLETLKSFDRLSPFGMDNKKP
VFLVRNFKVEGARSMGAGNTHLKLKISQEDATFEVVAFGLGSLEAEFAQAQDLELAVQLS
VNQWNGQTTLQLMLVDARVDGVQLFNIRSKNASLPAGVPVLDFTQELPDLTGASAVVVGN
IPEDIEQLRQIFQEHDFQAVYFKNEIAKAYYLTGYGSRDQYAKLYKTIYQYPEFDVRYKL
KDLAAYLKIQQILLVKMIQIFQELGFVTIENGIMKVNKAAKKREITESTIYQKLKQTVKE
QELMALGTVREIYDYLTGQAT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcaaaatacgattggcagttagcttcgccaagtgcagatgaggccttttta
gcccttgccaaaaaagcaggcctggaagcgtccgtagcaaccttgctgtatgagcgtggc
attcaaaccaaagaggatttagaagactttttagaacccaagttggagaagctacatgac
ccttatttgctccatgatatggacaaggcagtggggcgcatccgacgggctatcgaagat
tatgagcagatcctcatctacggagactatgatgcggacgggatgacctcagcctccatt
atgaaggaaaccttggagcagatgggagcagaggtgcaagtctacctacccaaccgcttc
acagacggctatggtcccaatgagagtgtctacaaatactttatcgagcaacaaggcatt
tccctgattgtcacggtggacaatggggtagcgggcaatcaagccattgccatggcccaa
gcgatgggggttgatgttatcgtgaccgaccaccactctatgccagaggttttgcctgat
gcttatgcgatcattcatccggagcatcctgatgcggattatcccttccattatctagca
ggatgtggtgtggcctttaagttggcttgtgccctccttgaggaagtaccagtcgatctc
ttagacttggtagccattgggactattgcagacatggtcagtctgacggacgagaatcgg
atcttggtcaaatacggtctgggtgttctccaacatacccagcgcatgggcttgcaggag
ctcttggagatcgcagggattcgtccggaggatgtcaatgaagaaacggttggttttcag
attgctcctcgtctcaatgctcttggccgccttgatgaccctaatccagctatcgaacta
ctgacaggatttgacgatgaagaggcgcacgagattgccctcatgattcatcagaagaat
gaagaacgtaaagaaattgtccaagctatctatgacgaagctaaaaccatggtggatcca
agtttgtcagcccaggtcttggccaaagaaggctggaatccaggggtccttggtattgtc
gctggtcgtttgttggaagagcttcatcagccggtcgttgttttaagcatcgaagatgga
cgagctaaggggagcgctcggagtcctgagtcggtcaatatctttgaagccctcgatccc
taccggtcgctctttgtcgcctttggaggacatgccggagcagcagggatgacgctggag
gtggaccaacttcctgccttgtctcaggctcttacggattacattgcagaacaagaaatt
gatctcagcagcaagtccagcttagccatcgacgaggaactacatctaacagaactaacg
cttgagaccttgaaaagctttgatcgcctgagtccatttggcatggacaataaaaagccg
gtctttctggtccgtaatttcaaggtagaaggggcgcgctcgatgggagccggcaatacc
catttgaaactcaaaatttctcaagaagatgcgacctttgaggtggtggcctttggtttg
ggaagcttagaggcagagtttgcacaggcgcaagacctagagctagctgtgcagttgtcg
gtcaaccaatggaatggtcaaacgactctccagctcatgctggttgatgcgcgtgtggac
ggtgtgcagctcttcaatatccgctctaaaaatgccagcctccctgcaggtgttcccgtt
ctggattttacccaagaactgccagatctgacaggcgcatccgctgttgtagttggaaat
atccctgaggatatagagcaactacggcaaatcttccaagagcatgatttccaggctgtc
tatttcaaaaatgagatcgccaaagcctactatctgacaggatatggtagcagggaccag
tatgccaagctctataagaccatctatcagtacccagagttcgatgtccgctacaaactc
aaagatctagcagcctatctcaagatccagcagatcctcttggtcaaaatgatccagatc
ttccaagagctgggctttgtgaccattgaaaatgggatcatgaaggtcaataaagcagca
aaaaaacgggaaatcacagaaagcactatctaccaaaaactcaaacaaacggtgaaagaa
caggaattaatggctcttggaacagttcgcgaaatctatgattatctgacaggacaggcc
acatga
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integrated database retrieval system
