Streptococcus lingualis: SM123_06970
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Entry
SM123_06970 CDS
T10630
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
slin Streptococcus lingualis
Pathway
slin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SM123_06970 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slin03021
]
SM123_06970 (rpoD)
Transcription machinery [BR:
slin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SM123_06970 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
WPS46324
UniProt:
A0ABZ0SWT0
LinkDB
All DBs
Position
complement(1452098..1453207)
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AA seq
369 aa
AA seq
DB search
MAKEQKDITTLDVQIAEFIRSHKKSGTATDDEINDKLVIPFTLDADGIEDLLQRIQDAGI
SITDKDGNPSARVLNNEEEPELSDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQEL
AILVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaacaaaaagatattacaacattggacgttcaaattgcagagtttattcgc
agccacaagaaaagtggaactgcaacagatgatgaaattaatgacaagttggttattcca
ttcacactagatgcagatgggattgaagatcttttgcaacggattcaagatgcaggaatt
tcgatcacggataaagatggtaacccaagtgcgcgtgtgttgaacaatgaagaagagcca
gaattgtcagatgaggaattgcttggaagcaactctgccaaggtcaacgacccagtacgg
atgtacttgaaagaaattggggttgttcctcttttgacaaatgaagaagaacaagaattg
gctatcttagtggaacaaggtgacttggaagccaagcaacgtcttgcagaagccaacctt
cgtttggttgtatccattgcgaaacgttacgttggtcgtggaatgcaatttttggatttg
atccaagaaggaaatatgggcttgatgaaggccgttgataagtttgactataccaaaggg
ttcaagttctctacctatgctacttggtggattcgtcaggctatcactcgtgccattgca
gaccaagcacggaccattcggatccctgttcacatggtggaaaccattaacaagttggtt
cgtgaacaacgcaatctcttgcaagaattgggacaagacccaacgcctgaacaaatcgct
gaacgcatggatatgacgcctgataaggtacgcgaaatcttgaagattgcccaagagcct
gtttctttggaaacgccaatcggggaagaagacgatagccatttgggagatttcatcgaa
gatgaagtgattgaaaatccagtagactacaccactcgtgtggttctacgtgaacaatta
gatgaagtcctcgataccctgacagaccgtgaagaaaacgtacttcgtttacgtttcggt
ttggatgatggaaaaatgcggaccttggaagatgtgggtaaagtcttcaacgtgacccgt
gaacggatccgtcagatcgaagccaaagccctccgtaaactccgccacccaagcagaagc
aaaccattgcgtgattttattgaggattaa
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integrated database retrieval system
