Streptococcus lingualis: SM123_08325
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Entry
SM123_08325 CDS
T10630
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
slin Streptococcus lingualis
Pathway
slin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SM123_08325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slin03019
]
SM123_08325
Messenger RNA biogenesis [BR:
slin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SM123_08325
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WPS46574
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Position
complement(1718842..1720449)
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AA seq
535 aa
AA seq
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MNFVITGVFAAVIGLVIGYVGTALKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLESRLAERASNLDRKDDIL
TSKEQSLEHKEQSLTDRTKHIDAREQQLEELEHKKVEELERVAALSQGEARDIILSQTEE
QLSKEIASRIRDAELEVKERSDKIAKDILVQAMQRMAGDFVAEQTNSTVHLPDDSMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRQEIDNRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKTSFALQ
AGREIRIMVSPEAIKDDKVTILAHDIREKIESNLEYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgttattacaggtgtttttgccgcggtcattggtttagtcattggatatgtg
ggaactgctcttaaaatgaaagcttcaaaagaagctgcggaactcacccttttgaatgct
gaacaagaagcaacgaatttacgtggacaggctgaacgcgaagccgatttgattttaaaa
gaggcgaagcatgagtcaagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgtgaagaggtcgatgctgagtttaagtcagaacgacaagaattgaag
caattagaaagccgtttggcagaacgtgctagcaatcttgatcgcaaagacgacatttta
acaagcaaagaacagtctcttgaacacaaagagcaaagtcttacagatagaactaaacac
attgatgcgcgtgaacaacagctggaagagcttgaacacaagaaagtagaagaactggaa
cgtgtcgctgctctaagtcaaggagaagcgcgtgacattattttgagtcagacggaagag
caactttcaaaagaaattgcctcacggattcgtgatgctgaattggaagtgaaagaacgt
tctgataaaatcgcaaaagacattctcgtgcaagctatgcagcgaatggcgggtgatttt
gttgctgagcaaacaaactcaaccgttcatttgccggacgatagtatgaagggtcggatt
atcggtcgtgaaggtcgcaatattcgtacctttgagagtttgacaggtgtcgatgtgatt
attgatgatacgcctgaagtggtgaccttgtcagggtttgatccgattcgtcgtgaaatc
gcccgtatgacaatggagagccttctcaaagatggtcggatccatccagcccgtatcgaa
gagctggttgagaagaaccgtcaggaaattgacaaccggattcgtgaatacggtgaagca
gctgcctatgaaattggtgcgccaaacctccatccagatttgatgaaaatcatgggacgg
ttgcaattccgtacttcttatggtcaaaatgttttgcgtcactccattgaagttgccaaa
ctttctggtattattgctagcgagttgggtgaaaatgctaccttggcacgacgtgcagga
ttcttacatgatatcggtaaagcgattgaccgtgaagtggaaggaagtcacgttgagatt
ggaactgaattggcacggaagtacaaggaacacccagtggtggtcaataccattgccagt
caccatggtgacgtggaaccagaaagtgtcatcgcagtcattgtcgctgcagcggatgcc
ttgagtgcagctcgacctggagcacgaagtgagtcacttgaaagctacatcaaacgcttg
caagatcttgaagaaattgcaaatagttttgaaggagttaagacaagtttcgcccttcaa
gcgggtcgtgaaatccgtattatggttagtcctgaggcaatcaaggatgataaagtgacg
atcttggctcatgatattcgtgagaagatcgagtccaatcttgaatatcctggaaacatt
aaggttaccgttattcgagaattgcgtgcagtcgattacgcaaaataa
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