Streptococcus lingualis: SM123_08410
Help
Entry
SM123_08410 CDS
T10630
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
slin Streptococcus lingualis
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slin03019
]
SM123_08410
03009 Ribosome biogenesis [BR:
slin03009
]
SM123_08410
Enzymes [BR:
slin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SM123_08410
Messenger RNA biogenesis [BR:
slin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SM123_08410
Ribosome biogenesis [BR:
slin03009
]
Prokaryotic type
rRNA helicases
SM123_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
PHD_like
Motif
Other DBs
NCBI-ProteinID:
WPS46590
UniProt:
A0ABZ0SS80
LinkDB
All DBs
Position
complement(1735908..1737251)
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTEFNFKPYIQEALKEINFREATEVQEKLIPIVLAGNDLVGESKTGSGKTHTFLLPIF
QTLNEDSEQVEAVITAPSRELATQIYQAARQIASHSDKEIRIVNYVGGTDKSRQIEKLQV
KQPHIVIGTPGRIYDLVASGDLAIHKAHTFVVDEADMTLDMGFLSTVDKIASRLPQQLQF
LVFSATIPQKLQPFLKKYLSNPVMEQIKTKTVISDTIDNWLVSTKGRDKNEQIYQLTKTL
QPYLAMIFVNTKTRADDLHAYLVAQGLKVAKIHGDIPPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGVAITLYQPSDDSDIRELEKM
GIRFVPKVLKNGVIEDTYDRDRRANREKKQEKLDIEMIGLVKKKKKKIKPGYKKKIKWAV
DEKRRKAKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagagtttaattttaagccctatattcaagaggcactgaaagaaatcaat
tttagagaagcaaccgaagtacaggaaaaactaattccgattgtcctagctggaaatgat
ttggttggagagtcaaagacaggttctgggaagacccatactttcctcttgccgattttt
caaaccttaaatgaagatagtgagcaagttgaagcggtcatcacggctcctagtcgggag
ttggcgacgcaaatttaccaagctgctcgtcaaatcgctagtcattctgacaaagagatt
cggattgtaaattatgttggaggaacggataaaagccgtcagattgaaaaattgcaggtc
aaacaaccacatatcgttattggaactccaggccggatctatgatctggttgcatcgggt
gatctggctattcataaggcccatacttttgtagtagacgaggcagatatgacactggac
atgggattcttgtctactgtggataagattgcttcaaggcttccgcaacaactgcaattt
ttagttttttcagccaccattccgcaaaaattgcagcctttcttgaaaaaatatctctca
aacccagtcatggagcaaattaagaccaagacggtgatttcagataccatcgataattgg
ctggtttcgaccaagggtcgggataaaaatgagcaaatttaccaattgaccaagaccttg
caaccttatttggccatgattttcgtcaataccaaaacgagagcagatgatctccatgct
tatctagtagcccaaggattgaaagtggcgaagattcacggagatatcccaccacgtgaa
cggaaacggatcatgaatcaggttaaaaatcttgattttgagtatattgtggccacagat
ttagcggctcgtggaattgatatcgaaggggtgagtcatgtcatcaacgatgctattcca
caagatctttctttctttgttcaccgtgttggccggacagggcgcaatggtctaccaggt
gtcgctattactctttatcaaccgagtgatgattcagatatccgtgaactagaaaaaatg
ggcattcgtttcgtaccgaaagtgttgaaaaatggggttattgaagatacttatgatcgg
gacagacgggccaatcgtgagaagaagcaagagaaactcgacattgaaatgattggtctg
gtgaagaagaaaaagaaaaaaatcaaaccaggctacaagaaaaaaatcaaatgggcagtt
gatgaaaagcggagaaaagctaaaagagctgaaaaccgtgcgcgtggtcgggcggaacga
aaggccaaacgccaaactttctaa
DBGET
integrated database retrieval system
