Streptococcus lingualis: SM123_08930
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Entry
SM123_08930 CDS
T10630
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
slin Streptococcus lingualis
Pathway
slin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SM123_08930 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slin03021
]
SM123_08930 (rpoE)
03400 DNA repair and recombination proteins [BR:
slin03400
]
SM123_08930 (rpoE)
Transcription machinery [BR:
slin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SM123_08930 (rpoE)
DNA repair and recombination proteins [BR:
slin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SM123_08930 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
WPS46685
UniProt:
A0ABZ0SXE0
LinkDB
All DBs
Position
complement(1841963..1842547)
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AA seq
194 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILELRGRDHEMYFSDLVNEIQNYLEKSNSEIREALPLF
YTELNVDGSFIPLGDNKWGLRSWYAIDEVDEEIIALEETDEDETPKKRKKKRVNAFMDGD
EDAIDYNDDDPEDEEVYEADPALSYDEENPDDEKSEVEAYDAEINEIVPDDLGEEVELSE
EDDEEEDSEDEEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctggacaagaaaaaagtgaactttctatgattgaagtggcg
cgtgcgattttggaattacgcggacgtgaccatgaaatgtactttagcgatcttgtaaat
gaaattcaaaattaccttgaaaaatcaaacagcgagatccgtgaagctcttccattgttc
tacacagaattgaatgtagatggaagctttatcccacttggagataacaaatggggtctt
cgttcatggtatgccatcgatgaagttgacgaagaaatcatcgctcttgaagaaacagac
gaagatgaaactcctaagaaacggaagaaaaaacgtgtcaatgccttcatggatggagac
gaagatgcgatcgactacaacgacgatgatccagaagacgaagaagtttacgaagcagat
ccagctctttcatatgatgaagaaaatccagatgatgaaaagagtgaagtcgaagcttac
gatgctgaaatcaatgaaatcgtaccagatgatttgggtgaggaagttgaattaagcgaa
gaagacgacgaagaagaggattctgaagacgaggaagaagaataa
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