Simiduia litorea: R50072_01210
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Entry
R50072_01210 CDS
T10759
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slio02000
]
R50072_01210
01504 Antimicrobial resistance genes [BR:
slio01504
]
R50072_01210
Transporters [BR:
slio02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R50072_01210
Antimicrobial resistance genes [BR:
slio01504
]
Gene variants
Tetracycline resistance genes
Transporters
R50072_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
Motif
Other DBs
NCBI-ProteinID:
BFM09968
LinkDB
All DBs
Position
118642..120051
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AA seq
469 aa
AA seq
DB search
MIDPSWLSLLPPFLAIGLALATRQVYLALFAGIWLGYFLLDDVNLLASLAQAIEASIAVL
ASPGDARVVVFTLVVGAFILTLERSGAVTGLVAWLERARWVNNGKRAQWLSWCIGVLIFI
ESNITVLVAGTVARPLFDRYKIAREKLAYIIDSTSAPICILIPLNAWGAFNLGLLDGLGV
DDPLQVLLASIPLNLYAISAVALAAFTIARSYNPGPMAEAQARADRGELVGLDVVVDTAV
APDKAAALAQPRAANMLVPVLTLVLAMPIGLWITGDGDLLAGSGSTAVLWASLLALVVIS
VMALAQRQTNLEKLSHTWLEGAGRMLPIAVVLVLALALGTVAKALGTGVYVAGLMGDTIP
VALLPAVIFLIAGVIAFSVGSSWGTFSIMMPIAIPIAVALGAEPALFVAAVLSGGIFGDH
ASPISDTTIVSSLAAGTEHIDHVKTQLPYAGQAALISTVGFVLLGVLML
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacccaagctggctttcgcttttgccgccctttctcgcgattggtttggccctc
gcaacacggcaggtgtacttggccttgttcgcgggtatttggctaggttatttcctactc
gatgacgttaacctgttggcgtctttggctcaggctattgaggcatccattgcggtgttg
gccagccccggcgatgcccgagtggtagtgtttaccttggttgtgggggctttcattctc
acccttgagcgcagtggcgcggtgaccggtttagtggcgtggctcgagcgggcgcggtgg
gtgaacaatggcaagcgggcgcaatggttgagctggtgtattggtgtgctcatttttatc
gaatccaacatcaccgttttggtggccggcacggtggcgcggcctctgttcgatcgctat
aaaattgcccgggaaaagctcgcctacattatcgattcaacctccgcacccatttgtatt
ttgatcccgctaaacgcctggggcgcgtttaatttaggtttattagatggcttgggggtg
gacgatccgctgcaggtgctgttagccagtattccgctgaatctatatgccattagcgcc
gtcgcgctggccgcgtttaccatcgctcgcagctacaatcccgggccaatggccgaggcg
caagcgcgcgccgatcgcggtgagctggtgggcttggatgtggttgtggatacagctgtc
gcacccgataaagccgccgcgcttgctcagccgcgggcggcgaacatgctggtgccggta
ttgaccttggtgttggcgatgcccataggcttatggattaccggcgatggcgatctactc
gccggttccggttctaccgccgtactctgggcgagtttactggcgctagtggtgatttcg
gtgatggccttagcgcagcgtcaaaccaatttagaaaagctctcccacacctggctggaa
ggcgcgggccgcatgctgcctattgctgtcgtgttagtgctggcgctggccttgggcaca
gtggccaaggccctaggcacgggcgtgtatgtcgcgggactgatgggcgataccattccc
gtggcgttactaccggcggtgattttcttaatcgctggggtaatcgccttttcggtgggg
tctagctggggcaccttctcaattatgatgcctattgccatacccattgccgttgcgctg
ggcgcggagccggcgctgttcgtcgcggcggtgctctctggtggcatttttggcgatcac
gcctcacccatttccgataccaccattgtttccagtcttgctgcgggcacggaacatatc
gatcacgtgaaaacccaactaccctatgcggggcaggcggcgctaatcagtactgtgggt
tttgtcctcctaggcgtcctgatgctgtga
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