Simiduia litorea: R50072_01430
Help
Entry
R50072_01430 CDS
T10759
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slio Simiduia litorea
Pathway
slio00300
Lysine biosynthesis
slio00470
D-Amino acid metabolism
slio01100
Metabolic pathways
slio01110
Biosynthesis of secondary metabolites
slio01120
Microbial metabolism in diverse environments
slio01230
Biosynthesis of amino acids
Module
slio_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R50072_01430 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R50072_01430 (lysA)
Enzymes [BR:
slio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
R50072_01430 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BFM09990
LinkDB
All DBs
Position
complement(135292..136536)
Genome browser
AA seq
414 aa
AA seq
DB search
MSYFPRQQAHLYAEALPLADIAQQFGTPTYVYSRAALTDAYNQYATALGDHDGLVCFAVK
ANSNLGVLGLLADLGAGFDIVSEGELERVLLAGGKPERIVFSGVGKTEAAIRKALEVGVH
CFNVESEAELTLLADIAKQLGTKAPISLRVNPDVDAQTHPYISTGLKENKFGIDIQRAPL
VYKRAAALNSLNIIGVDCHIGSQLTQLAPFVDALDRLLALIDTLKADGIVLKHIDIGGGL
GVTYRDETPPPIGSLIAHVKEKLQGRNLALVMEPGRSICANAGVLLSEVLFLKPTEHKNF
AIIDAAMNDNIRPALYQAWQDVQPVELKADEAKTWDLVGPVCETGDFLAKDRTLALAAGD
LIAVMSTGAYGFTMSSNYNSRTRAAEVIVDGNRAYLVRERETLADLTRGESLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacttccctcggcagcaggcgcacctgtatgcagaagcgctgccactggccgat
attgcccagcaatttggcacaccaacctatgtttatagccgtgcggcgttaaccgacgcc
tacaaccagtatgcgaccgccttgggcgatcacgacggtttggtgtgctttgccgttaag
gcgaactctaacctcggcgtgctggggttattggcagacttaggcgcaggcttcgatatt
gtctctgaaggcgagctagagcgcgtgctactcgcgggcggtaaacctgagcgcatcgtc
ttttcaggggttgggaaaacggaggccgccattcgcaaggcgctcgaagtcggcgtgcat
tgttttaatgtcgaatcggaagccgagctcacactattagccgatattgccaaacagttg
ggcacaaaggcacccatatcactgcgggtcaaccccgatgtcgatgcgcaaactcacccc
tatatttcgaccgggctaaaggaaaataaattcggtatcgatattcagcgcgcgcccctg
gtgtacaaaagagccgcggccctcaacagcttgaacatcattggcgtcgactgccatatc
ggttcgcagttaacccaactggcgccctttgtcgacgcgttagatcgcttattagcactt
atcgatacattgaaagccgacggcatcgtgctcaagcacatcgatataggcggcggcttg
ggggtaacttaccgcgatgaaactccaccacctattggcagtttaattgcgcacgtaaaa
gaaaaactacagggccgtaatctcgccttggtgatggagcctggccgatctatttgcgcc
aatgctggcgtattgttgtctgaagtgttgtttctaaagccgaccgagcacaaaaatttt
gccattattgatgctgctatgaacgacaatattcgcccagcgctctatcaagcctggcaa
gacgtacagccagtagaattgaaagctgacgaggctaaaacctgggacctggtcggtccg
gtttgcgaaaccggcgattttctcgccaaagatcgcacactagcgcttgccgccggtgac
ttgatcgcagtaatgtccactggtgcctatggttttaccatgagctcaaattacaacagc
cgcacccgcgccgccgaagtgattgtagatggcaaccgcgcttacttggtgcgcgagcgg
gaaacgctagcagatttaacccgtggcgaatcgttactaccgtaa
DBGET
integrated database retrieval system