Simiduia litorea: R50072_01600
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Entry
R50072_01600 CDS
T10759
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slio Simiduia litorea
Pathway
slio03030
DNA replication
slio03410
Base excision repair
slio03420
Nucleotide excision repair
slio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50072_01600 (polA)
03410 Base excision repair
R50072_01600 (polA)
03420 Nucleotide excision repair
R50072_01600 (polA)
03440 Homologous recombination
R50072_01600 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slio03032
]
R50072_01600 (polA)
03400 DNA repair and recombination proteins [BR:
slio03400
]
R50072_01600 (polA)
Enzymes [BR:
slio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50072_01600 (polA)
DNA replication proteins [BR:
slio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R50072_01600 (polA)
DNA repair and recombination proteins [BR:
slio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R50072_01600 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50072_01600 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BFM10007
LinkDB
All DBs
Position
158661..161417
Genome browser
AA seq
918 aa
AA seq
DB search
MANPVVLVDGSSYLYRAFHALPPLKNSKDMPTGAVKGVINMLRRLQKDYPESPIVVVFDA
KGKTFRDDIYADYKANRPAMPDDMRPQVQPIHDIVRAMGLPLLVIEGVEADDVIGTYCAQ
AVAAGIEVVVSTGDKDMAQLVNSHVTLVNTMTELVMDPEGVVAKFGIPANLIIDYLALMG
DKVDNIPGVPGVGEKTALGLLQGLGGLDDIYAQLDKVAELSFRGAKTMAAKLLEHKDKAY
LSYELATIKLDVDLPQALPELQNQTPDSAALRSLFDMLEFKSWVAELDSAPASPAGVAAP
AASSTQEVAELAAPLARNYEVILTQADFERWLHKLSQAELFAFDTETTSLDYMQAQIVGV
SFAVEAGSAAYVPVAHDYMEAPVQLERDWVLAQLKPLLEDETRAKVGQNLKYDASVLANY
GISLAGIAFDTMLESYVLNSTASRHDMDSLASFYLDESTIKFEEVAGKGAKQLTFNQVAL
EQAGPYAAEDADITLRLHQVLAPQLDAEPSLKQVLTSIEMPMVKVLSAVERTGALVDAKL
LGEQSIELGERLTELEREAFELAGEPFNLSSPKQLGAILFEKLALPVLKKTPKGAPSTAE
DVLQELALDYPLPKILMVYRGLAKLKSTYTDKLPLMINPSTGRIHTSYHQAVTATGRLSS
TDPNLQNIPIRTEEGRRIRQAFVAPKGYKLVAADYSQIELRIMAHLSDDAGLLDAFSKGL
DVHKATAAEVFGVPLDQVSQDMRRSAKAINFGLIYGMSAFGLAKQLHIGRHEAQQYIDTY
FDRYPGVARYMDQTRALAHEQGYVETLFGRRLHLPEINDRNKMRQQAAERTAINAPMQGS
AADIIKRAMVDVYHWLQTPAAPDARIIMQVHDELVLEVAEADVEKLKIELCQRMANAASL
KVPLLVEAGEGDNWDEAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccagtggtcttagttgacggatcttcttacctctaccgggcttttcacgcc
ctgccgccgctaaaaaacagtaaggatatgcccacgggggcggtaaaaggcgtcatcaat
atgttgcgccggttacaaaaggactacccggaaagtcccatcgtggtggtatttgatgcc
aagggtaaaacctttcgcgacgatatctacgcagactacaaagccaaccggcccgccatg
ccagatgatatgcggccccaggttcagcctatacacgacatagtgcgtgctatgggcttg
ccgctcttagtgatcgaaggtgtagaggccgatgatgttattggtacctattgtgcccaa
gcggtagcggcgggtattgaggtggtggtgtccactggcgataaggatatggcccagcta
gtgaacagtcatgtgaccttggtgaataccatgaccgaattggtgatggaccctgaaggt
gtggttgccaagtttggtatccctgccaacttaatcatcgattatctggcgctaatgggt
gacaaggtggataacattcccggtgtgcccggcgtgggtgaaaaaacggcactgggtttg
ctacagggcttgggcggcttagacgacatttacgcccagctcgacaaggttgccgaactg
agtttccgcggcgctaagactatggcagcaaagttgctggagcacaaagataaagcctac
ctgtcttacgaattagctaccataaaactcgatgtggatttgccccaggccttgcctgaa
ttgcaaaatcaaacgccagacagtgcagcgctgcgcagcctgttcgacatgctcgagttt
aaatcctgggtggccgaattagacagtgcgccggcatcgccagcgggcgtggctgccccc
gcagcttcatcgacgcaagaggtcgcagagctagccgcgccgctagcgcggaactacgaa
gtgatattgacccaggcggatttcgagcgctggttgcataagttatcgcaggccgagtta
tttgcctttgacaccgaaaccacgagccttgactacatgcaggcgcaaatcgtcggcgtc
tcctttgctgtcgaggccgggtctgcggcctatgtgccggttgcgcacgattacatggag
gcaccggtgcagcttgagcgcgattgggtactggcacagctgaagcccctgctcgaagac
gaaacgcgagccaaggttgggcaaaacctaaaatacgacgccagcgtcttggctaactac
ggtatatcgctggcgggcattgcctttgacacaatgctggaatcctacgtgctgaattcc
accgccagtcgtcacgacatggacagcttggccagcttctatctcgatgaaagcaccatt
aaatttgaagaggtggcgggtaaaggtgctaagcagctcacctttaatcaagtggcgtta
gaacaggccggcccctacgcggcggaagatgccgatattaccttaaggctgcaccaggta
ttggcgccgcaattggatgctgagccgagcttgaagcaagtgcttactagcattgaaatg
cccatggttaaggtgttatcagccgtggagcgtacaggcgctctagtggatgccaagctc
ttgggcgagcagagtatagagttgggtgagcgtttgactgaactcgagcgcgaggcgttt
gagctcgccggcgagccatttaacttgagttcgcctaagcagttgggtgccattttgttt
gaaaagttggccttgccggtgttgaagaaaacccccaaaggcgcaccctctaccgcagag
gacgtattgcaagagctggctttagactacccgctgccgaaaatactgatggtatatcgc
ggcctagccaagctaaagagtacttacaccgacaagctgccattgatgatcaatcccagc
acgggtcgcatccatacctcttatcatcaggccgtgaccgcgaccgggcggttgtcatca
accgacccaaatttgcagaatattcccattcgcaccgaagaggggcgacgcattcgccaa
gcctttgtggcgccaaaaggctacaagttagtggcggcggattattcgcaaattgaactg
cggattatggcgcacctgtccgacgatgcgggtttgctggatgcctttagcaaaggcttg
gatgtacataaggcaacagccgcggaagtgtttggcgtacctttggatcaggtcagccaa
gatatgcggcgcagtgccaaggccattaactttggcttgatttacggtatgtcggctttt
ggcttggccaaacaattacatatcggccggcacgaagctcagcaatatatcgacacctat
ttcgatcggtatcccggtgtggcgcgctatatggatcaaacgcgcgctttggcgcacgag
caaggttatgtggaaacgctgtttgggcgtcgattacacctgccggaaattaacgaccgc
aataaaatgcgccagcaggcggccgagcgaacggccattaacgcgcccatgcaaggttcg
gcggccgatattatcaagcgtgcaatggtggatgtttatcattggctgcaaacacccgcg
gcgcccgatgcccgaattatcatgcaagtgcacgacgaattggtgctagaagtggccgag
gccgatgtcgagaaacttaagattgagttgtgccagcgcatggccaatgccgcgagcctc
aaggtgccgctgctggtcgaagcgggtgagggcgacaactgggatgaggcgcattaa
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