Simiduia litorea: R50072_02400
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Entry
R50072_02400 CDS
T10759
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slio Simiduia litorea
Pathway
slio00260
Glycine, serine and threonine metabolism
slio00460
Cyanoamino acid metabolism
slio00630
Glyoxylate and dicarboxylate metabolism
slio00670
One carbon pool by folate
slio00680
Methane metabolism
slio01100
Metabolic pathways
slio01110
Biosynthesis of secondary metabolites
slio01120
Microbial metabolism in diverse environments
slio01200
Carbon metabolism
slio01230
Biosynthesis of amino acids
slio01240
Biosynthesis of cofactors
slio04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R50072_02400
09102 Energy metabolism
00680 Methane metabolism
R50072_02400
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R50072_02400
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R50072_02400
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R50072_02400
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R50072_02400
Enzymes [BR:
slio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R50072_02400
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BFM10087
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Position
complement(253618..254946)
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AA seq
442 aa
AA seq
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MMYNARLQIFIIVRLQQGLPMFDKSQTIASYDPELWASIQNEERRQEEHIELIASENYTS
PMVMVAQGTKLTNKYAEGYPGKRYYGGCEYVDVAESLAIERAKELFGADYANVQPHSGSQ
ANGAVYAALCEPGDTVLGMSLAHGGHLTHGASVSFSGKVYKSVQYGINTETGVIDYDEVE
RLAVEHKPKMIVAGFSAYSQIMDWQRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVQI
ADVTTTTTHKTLRGPRGGLILAKANEAIEKKLNSAVFPGGQGGPLMHVIAAKAVSFKEAM
SPEYKAYQQQVVKNAKAMAATFIERGIKIVSGGTENHLMLVDLIGKEYTGKDADAALGAA
NITVNKNAVPNDPRSPFVTSGLRVGTPAITTRGFKEEETVQLTHWMCDVLEALESGKAEA
KIEEVKAKVLDICKRFPVYGDI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgcgcgccttcaaattttcatcattgtcaggctacagcagggcttaccc
atgtttgataaatcacagaccatcgcatcctacgacccagaactgtgggcctctatccaa
aacgaagagcgccgtcaggaagagcatatcgaactgattgcctctgaaaactacaccagc
cccatggttatggttgcccagggcaccaaactgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgtgaatacgtcgatgtggccgaatctttggctatcgaa
cgcgctaaagagctgttcggagcagattacgccaacgtacaaccgcactcaggctcgcaa
gccaacggtgctgtgtatgccgcgctgtgtgagccgggcgacaccgttcttggtatgagt
ttagcccacggtggtcacttgacccacggcgcttctgtcagcttttctggcaaagtctat
aagtcggttcagtatggtatcaacaccgaaaccggcgtgattgattacgatgaagttgag
cgcttggccgttgaacacaagccaaagatgatcgtggccggcttctctgcttactcacaa
atcatggattggcagcgtttccgcgccatcgccgacaaagtaggcgcttacttattcgtg
gatatggcacacgttgcaggccttgtagccgccggtgtttaccctaacccggtacaaatt
gccgacgtgaccaccaccactacgcacaaaaccttgcgcggcccacgcggcggtttgatt
ctggccaaagccaacgaagccatcgagaagaagctgaactcagcggtattcccgggcggt
caaggcggcccattaatgcacgtgatcgcagccaaagcggtgagcttcaaagaagccatg
agccccgagtacaaagcctatcaacaacaggttgtgaagaacgccaaagccatggccgct
accttcatcgagcgcggcattaaaatcgtttccggcggcaccgaaaaccatttaatgctg
gttgatttgattggcaaagagtacaccggtaaagatgccgacgccgccctaggcgccgcc
aacatcaccgtgaacaaaaacgccgtaccgaacgacccacgctcgcccttcgtaacctct
ggtctgcgtgttggcacccccgccatcaccacccgaggctttaaagaagaagaaaccgtg
cagctaacccactggatgtgcgacgtgctagaggccttagaaagtggcaaggccgaggcg
aaaatcgaagaagtgaaagccaaggtgttggacatctgcaaacgtttccctgtttacggc
gatatctag
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