Simiduia litorea: R50072_02800
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Entry
R50072_02800 CDS
T10759
Name
(GenBank) hypothetical protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
R50072_02800
Enzymes [BR:
slio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
R50072_02800
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GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
BFM10127
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Position
307637..309877
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AA seq
746 aa
AA seq
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MNKIVSSALLSMALSFVVACGQDAKTAVPSNGSVVDAANLAAHPNLLLAAKDLPTLQAES
SRYPLFDRALTAAKNTVDEAMAAPVDVPFPKDPGGGYTHEQHKKNALLMYQAATLSAITG
DKAYGDWAITLLKKYAELYPSVPLHPEHKHQAPGKLFWQVLNDAWWLVYVIQAYDALLPQ
MSQADQTLISQQLLLPHARFLSEGSAETFNKVHNHGTWAAAAVGMTGLVLNEDHLVNIAL
RGLDGSGASGFLAQLDQLFSPDGYYTEGPYYQRYALLPFVVFARALERNKPELGIFDYRD
GIVLKAIYAAIQLSNGGLFFPLNDAIKDKGLDTVEMVFGVDVAYGLTGDKDLLAIAEYQQ
QVTLNGDGLAVARDLHQLQGAPSFSFGSKLFRDGPAGDQGGVAILRSGAATVVFKAASQG
MGHGHFDRLGWIYYDGANEIVSDYGASRYLNVEPKRGGIYLPENDTWAKQTVAHNALVRN
EESQFAGDVKAASKNNPQVTRFTQGDGWQLVSALEPNAYPGTEFDRTFVLLDKVGTEAPL
VIDLLRVRADEAANFDLPFYYQGQLMFHTGKARLALENLKPLGKSNGYQHLWNKGELVTE
KNSVQVSWLQRNRFYTLTQWMPEKSRIALTELGANDPEFNLRREAGLVVRYGKTKQATFV
SALESHGEYNGVREYTLAPRGVISDIRYTAVGDYSLVNITLKSGQAYSVAIAHTAQNGEH
RVDTADGAITWTGDVAVVQVAGNKNP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaattgtatccagtgccttactaagtatggcgctatctttcgttgttgcctgt
ggccaagatgcaaaaacggctgtgccaagcaatggctctgtcgttgatgctgctaaccta
gccgcacatcccaatcttctcttggcagcgaaagacctgcccaccttgcaggcggagtcg
tctcgttatccgctatttgatcgtgcgttgactgcggccaaaaataccgtagatgaagcc
atggctgcacccgtggatgtgccttttccaaaagatcccggcggtggctacacgcacgag
cagcataaaaaaaacgctttgttaatgtatcaagcggcaaccttgtcggcgataacgggt
gacaaagcctatggtgattgggctattactcttcttaaaaaatatgcagagctctacccc
agcgtacccttgcatccggagcataaacatcaagcgcccggaaaactgttttggcaggtg
ctcaatgatgcctggtggttggtttacgttattcaagcttacgacgcgctgttgccgcag
atgagccaggccgaccaaacacttatcagtcagcagctattgttaccgcatgcaaggttt
ttatccgagggctcggcggaaacgttcaacaaagtacacaaccacggtacgtgggccgca
gcggctgtcggtatgaccggtttggtgttgaacgaagatcatctcgttaatattgccttg
cgcggtttagatggcagcggcgccagtggctttttagcgcagctggaccaattgttttcg
cccgatggctattacacggaaggaccttattatcagcgctatgcactcttacctttcgtg
gttttcgcgcgcgcgttagagcgcaataaacccgagttaggtatttttgactatcgcgat
ggcattgtactcaaggccatttatgccgccattcaactgtcgaatggcggtttgttcttt
ccattgaatgatgcgattaaggacaaggggctcgatactgtcgagatggtatttggcgtc
gacgtcgcgtatggcctgaccggtgataaggatctgttagccattgcagaatatcagcag
caggtaacgctcaatggcgatggcctggccgtcgccagagatttacaccaattacagggc
gcgccgtcgtttagttttggctccaaattatttcgtgatggccccgcaggcgatcaaggt
ggcgtggcgatattgcgcagcggagcggcaacggtggtatttaaagcggcgtctcaaggc
atgggccatggtcacttcgatcgtctaggttggatctactacgatggtgcgaatgaaatt
gtcagcgattatggcgcgtcgcgctatctcaatgttgagcctaagcgcggcggtatttat
ttacctgaaaacgatacctgggcaaaacaaactgtggcccacaatgcgttggttcgcaat
gaagagtcgcaatttgccggggatgtgaaagcggcgagcaagaataatcctcaggttacc
cggtttacacaaggcgatggttggcagttggtctcggcgcttgagccaaatgcttatccg
ggtactgaatttgatagaaccttcgtgcttttggataaggttggtactgaagcgcctttg
gtaatcgatctgttgcgcgttcgtgcggatgaggctgcgaattttgatttgcctttttat
tatcaaggccagttgatgtttcacacagggaaagccaggctagcgcttgaaaaccttaag
ccgcttggcaagtctaatggctaccagcacctatggaataagggcgagctagtcaccgaa
aaaaattctgtgcaggttagctggcttcagcgcaatcgtttttataccttgactcaatgg
atgcctgaaaaatcccgcatcgcattaacggaattgggtgccaatgaccctgagtttaac
ttgcggcgcgaggcgggacttgtggtgcgctatggaaagaccaagcaggccacttttgta
tctgcgctggagagccatggcgaatacaatggtgtgcgcgaatatacgttagcgccgcgc
ggtgtcatcagcgatattcgctataccgctgtgggtgactattctctcgttaatatcaca
ctgaaatcgggccaggcttatagcgttgcaattgcgcataccgcacaaaacggtgagcac
cgtgtggatactgcagatggcgctatcacgtggactggtgatgttgctgtggtgcaagta
gccggtaacaaaaatccataa
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