Simiduia litorea: R50072_08420
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Entry
R50072_08420 CDS
T10759
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
slio Simiduia litorea
Pathway
slio00071
Fatty acid degradation
slio00280
Valine, leucine and isoleucine degradation
slio00310
Lysine degradation
slio00362
Benzoate degradation
slio00380
Tryptophan metabolism
slio00410
beta-Alanine metabolism
slio00640
Propanoate metabolism
slio00650
Butanoate metabolism
slio00907
Pinene, camphor and geraniol degradation
slio00930
Caprolactam degradation
slio01100
Metabolic pathways
slio01110
Biosynthesis of secondary metabolites
slio01120
Microbial metabolism in diverse environments
slio01200
Carbon metabolism
slio01212
Fatty acid metabolism
Module
slio_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R50072_08420
00650 Butanoate metabolism
R50072_08420
09103 Lipid metabolism
00071 Fatty acid degradation
R50072_08420
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R50072_08420
00310 Lysine degradation
R50072_08420
00380 Tryptophan metabolism
R50072_08420
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R50072_08420
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R50072_08420
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R50072_08420
00930 Caprolactam degradation
R50072_08420
Enzymes [BR:
slio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R50072_08420
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R50072_08420
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R50072_08420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
UDPG_MGDP_dh_N
F420_oxidored
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BFM10689
LinkDB
All DBs
Position
complement(965598..967742)
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AA seq
714 aa
AA seq
DB search
MSVFNYQKDADGIVTVTMDMTGPVNAMNEEYRGAMAETVAKLETEKELTGVIFASAKTVF
FAGGDLNELLAFEKGREAAFMAMLSTIKGDLRKLEKLPVPVVAAINGAALGGGFEICLAS
NYRIAYNHKSVQLGLPEVTLGLLPGGGGIVRMVNLLGLQAALPYLLEGKKVTPQEALNAG
MIDETVDTLDALLPRAKAYILENKGNAEAAQQPWDKKEFRIPGGSANSPKMAQVLAIAPA
MLAQKTRGLLPAPEQILDCAVEAARLDFDTALLIESRAFAYLVGTPEAKNMISTFFFQLN
KVNSGASRPSNIEPQLTKKVGVLGAGMMGQGIAYVSALAGIEVVLKDISIEAAEKGKAYS
SAILDKGIARGRVTEDKKNQVLALIKATADDQDLQGCDLIIEAVFENVALKNKITSATEK
YLCDSGIWGSNTSTLPITQLAEASSKPENFIGVHFFSPVDKMPLVEIICGEKTSDLALAK
AFDYARQIKKTPIVVNDSLGFFTSRTFGTYFDEGARLVVEGAHPIKVDNLGKAIGMPVGP
LTVHDEVSQELTRKAMETWTDMGVVDKWGEQNALREIIDFLTLKNGRGGRHHNGGYFDYS
DGNKTLWPNVLETYYKSEVTISDQDIKDRLLFRQVIETLKCLESNVLRTVADGNIGSIMG
IGAPLWTGGFLQFINTYGLDKFQVRCSELAATFGERFTCPAIVGEKIKGGDTFI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatttaattatcaaaaagacgccgatggcatagtcaccgttaccatggatatg
accggccccgtcaatgccatgaatgaagaatatcgcggcgccatggccgagactgtcgcc
aaactcgaaacagaaaaagagttgactggtgtgattttcgcctcggccaaaacggtgttt
tttgccggtggtgatctgaacgaattgctggccttcgaaaaaggtcgagaagcggccttt
atggccatgttaagcaccattaaaggcgacctgcgcaaactggaaaaactacccgtgccg
gttgtagccgccatcaacggcgctgccttgggtggcggttttgaaatttgcttagccagt
aactaccgcatcgcttacaaccacaaatcggtacaactcggcctacccgaagtgacctta
ggcctgctgcccggtggaggcggtattgtgcgcatggtgaatttattgggtctgcaagcc
gcgctgccctacttgctcgaaggtaaaaaagtgacaccgcaagaggcgcttaatgccggc
atgattgacgaaaccgtagataccctagacgccttattgcccagagccaaagcctatatt
ttggagaacaaaggcaatgccgaagcggcgcaacagccttgggataaaaaagagtttcgc
attcccggtggcagtgccaactcgcccaaaatggcacaggtgttagccatcgctcccgcc
atgctggcacagaaaacccgtggtttattgcctgcgcccgagcaaattttagactgtgcg
gtagaggcagctcgattagatttcgacaccgcactgctcatagaaagtcgcgccttcgcc
tatctggttggcacacccgaagccaagaatatgattagcaccttcttcttccaattgaac
aaggtcaacagcggcgcctcgcgcccgagcaacatagaaccacagctcaccaaaaaagta
ggtgttttgggcgccggcatgatgggtcaaggcattgcttatgtgtctgccttagcgggt
atagaagttgtgctaaaagacattagcatagaagccgctgaaaaaggcaaagcttactct
agcgcaattctcgacaaaggaattgcccgcggtcgcgttaccgaagacaaaaaaaatcag
gtgctggcgcttataaaagccaccgccgatgatcaagatctgcaaggttgcgatctcatc
atcgaagccgtatttgaaaacgtagcgctaaaaaataaaatcaccagcgctactgaaaag
tacttgtgcgacagtggcatctggggctctaacacctctaccctacccattacccaactg
gcagaagcgtctagcaaaccagaaaactttatcggcgtgcacttcttttctccggtagac
aaaatgccactggtggaaataatttgcggtgaaaaaaccagtgatctagcgctggccaaa
gcctttgactacgcccgtcaaatcaagaaaacgcccatcgtggtcaacgactccctaggt
ttctttacctcgcgtaccttcggcacctattttgatgagggtgcaagactcgtggtggaa
ggcgcccaccccattaaagtcgacaacctaggtaaagccatcggcatgcctgtcgggccg
ctgacagtgcacgatgaagtgagccaagaactcacccgcaaggccatggaaacctggacc
gacatgggtgtggtggataaatggggcgagcaaaacgcgctgcgcgagattatcgatttc
ctcaccttaaaaaatggtcgcggcggccgccatcataacggcggctactttgactatagc
gacggcaataaaaccctttggccaaacgtattagaaacctattacaagagtgaggtcaca
atctccgatcaagacataaaagatcggttactgtttcgccaagtgatagaaacgctcaag
tgcctagagagcaacgtcttacgcaccgttgccgatggcaacatcggttccatcatgggt
ataggagcgccactgtggacagggggttttctacaattcattaacacctacggattagat
aaatttcaggtgcgctgtagtgaattagcagcaacattcggtgagcgcttcacctgcccg
gccattgtcggcgaaaaaatcaaaggcggcgacaccttcatctaa
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