Simiduia litorea: R50072_10270
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Entry
R50072_10270 CDS
T10759
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slio Simiduia litorea
Pathway
slio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R50072_10270 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slio03019
]
R50072_10270 (groL)
03110 Chaperones and folding catalysts [BR:
slio03110
]
R50072_10270 (groL)
03029 Mitochondrial biogenesis [BR:
slio03029
]
R50072_10270 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slio04147
]
R50072_10270 (groL)
Enzymes [BR:
slio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R50072_10270 (groL)
Messenger RNA biogenesis [BR:
slio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R50072_10270 (groL)
Chaperones and folding catalysts [BR:
slio03110
]
Heat shock proteins
HSP60 / Chaperonin
R50072_10270 (groL)
Mitochondrial biogenesis [BR:
slio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R50072_10270 (groL)
Exosome [BR:
slio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R50072_10270 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R50072_10270 (groL)
Exosomal proteins of breast cancer cells
R50072_10270 (groL)
Exosomal proteins of colorectal cancer cells
R50072_10270 (groL)
Exosomal proteins of bladder cancer cells
R50072_10270 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BFM10874
LinkDB
All DBs
Position
1170904..1172541
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGNDARQKMLKGVNILADAVKITLGPKGRNVVLEKSFGAPTVTKDGVSVAKDI
SLEDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAHIKSIAQPCTDNKAIAQVGTISANSDESIGGIIAEAMDKVGKEGVITVEEG
NSLENELDIVEGMQFDRGYLSPYFINNQDNMIAEHDNPFLLLVDKKVSNIRELLPVLEAV
AKSGKPLIIVAEDVEGEALATLVVNNMRGIVKVAACKAPGFGDRRKAMLQDIAVLTGATV
ISEEIGLDLESTTLEHLGSAKRVTLSKENTIIVDGAGNAADIQARVAQIRVQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGTALI
RAVAAIKDLVGDNEDQTAGINLARRAMESPLRQIVTNAGEEASVVADKVKNGTGNFGYNA
GNSTYGDMLEMGILDPAKVTRTALQAAASIAGLMLTTEAMVADLPEEKGPAMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtaaaatttggcaatgacgctcgccagaaaatgctgaaaggcgta
aatattttagccgacgcggtaaaaatcactttgggcccaaaaggccgtaacgttgtatta
gagaaatcttttggcgcgccaaccgttacaaaagacggcgtatctgtggcaaaagacatc
agcctagaagacaagtttgaaaacatgggcgcgcagatggtgaaggaagtggcttctaaa
gcttctgacgacgccggtgacggcaccaccacggcaaccgtgttggcgcaatctatcgtt
aacgaaggcctgaaagccgttgccgctggcatgaacccaatggacttaaagcgcggtatc
gacaaggctgttatcgctgctgttgcacacattaagtctatcgctcaaccgtgcacagac
aacaaagcgatcgctcaggtaggtactatttctgccaactccgatgaatccatcggcggt
atcatcgcagaagccatggataaagttggcaaagaaggcgttatcaccgttgaggaaggt
aatagcttggaaaacgaattggatatcgttgaaggtatgcagtttgaccgtggttacttg
tcaccttacttcatcaacaaccaagacaacatgattgccgaacacgacaatcccttcttg
ttgttggtcgataaaaaagtttctaacattcgcgaattattgccggtgttggaagccgtg
gctaaatctggcaagccgttgatcattgttgcagaagatgttgaaggcgaagccttggca
acgctggttgttaacaacatgcgcggtattgtgaaagttgcggcttgtaaggcaccaggt
ttcggcgatcgtcgtaaagctatgctgcaagatattgctgtactgacgggtgcaactgtt
atttctgaagaaatcggtttggacttggaaagtactacgctcgagcatttaggcagcgcc
aagcgcgtaaccttgagcaaagaaaacaccatcatcgttgacggtgccggtaatgcagcc
gacattcaggcgcgcgttgcacaaattcgtgtacaaatcgaagatacatcttctgattac
gaccgtgaaaaactgcaagagcgcgtagcaaaattagctggcggtgttgcggtgatcaaa
gtaggcgcagccaccgaagttgaaatgaaagagaagaaggcgcgcgtagaagatgcgttg
catgcaacccgtgctgccgttgaagaaggcgttgtgcctggcggtggtactgctttgatt
cgcgctgttgctgcgatcaaagacttggttggtgacaacgaagaccagacggcaggtatt
aaccttgcccgtcgcgcaatggaatccccactgcgtcaaatcgtgaccaatgccggcgaa
gaagcgtctgtggtggccgacaaggtgaaaaatggtaccggtaacttcggttacaacgcc
ggtaatagcacctatggcgacatgttggaaatgggtattctcgatccagctaaagtaacc
cgtactgcattgcaggcggcggcttctattgctggcttgatgctcaccaccgaggcaatg
gttgctgatttaccagaagaaaaaggcccagcaatgcctgatatgggcggcatgggtggc
atgggcggcatgatgtaa
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