Simiduia litorea: R50072_10530
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Entry
R50072_10530 CDS
T10759
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slio Simiduia litorea
Pathway
slio03030
DNA replication
slio03430
Mismatch repair
slio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50072_10530 (dnaX)
03430 Mismatch repair
R50072_10530 (dnaX)
03440 Homologous recombination
R50072_10530 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slio03032
]
R50072_10530 (dnaX)
03400 DNA repair and recombination proteins [BR:
slio03400
]
R50072_10530 (dnaX)
Enzymes [BR:
slio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50072_10530 (dnaX)
DNA replication proteins [BR:
slio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R50072_10530 (dnaX)
DNA repair and recombination proteins [BR:
slio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R50072_10530 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_2
AAA_14
AAA_30
AAA_19
PIF1
nSTAND3
TsaE
AAA_28
SKI
Rad17
Mg_chelatase
RsgA_GTPase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BFM10900
LinkDB
All DBs
Position
1194322..1196457
Genome browser
AA seq
711 aa
AA seq
DB search
MSYQVLARKWRPRIFREMVGQEHVLQALINALDHNRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGVSSEPCGKCGACIEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPSRGRY
KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMNP
ERIVGHLAFVLEKELVPCEDAALWQLGRAADGSMRDALSLTDQAIAFGNGKVTEADVRAM
LGTIDQQFVYAILQAIATADGQAIFNAVNQLAEQAPDYQGALAELLSVLHRIAIAQALPA
AIDNSFGDREQVLDLAAKIPAEDIQLFYQTALLGRRDLPLAPDPRSGFDMVLLRMLAFKP
QGVADLPKAALGAPAAGTPAAAMPATPAESPATDKSVAPAPSAGAPSTPEQAKALVAAQV
EPAPVTASTVSTAPAPNSTSGSEANPTSTNPAAVADSPPWDDDDHAASNLYADEDAGSEP
LSTSAQAPTAPQPVQAVASSVLAPSVEAPVAASTPVVPAPAVVDVKPAIQPLPSPVANTP
QPPAHALPLDNQTGRAAPAVDVNPSKAQVSQAQLAEAVHSYHLVTLKPSDWQGLYLELKI
GGVLQSTAANSQLVAVEDNRLRFVLDQANANLFDVGHQSRLADQLTAYFNEPVLVDISPG
ELTAETPAATAVRLKAERAASALNSLQTDPLLQKLEREFQASLDINTVEPL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtactcgcccgtaaatggcggccgcgcatattccgtgaaatggtgggg
caggaacatgtgctgcaagcgctgatcaacgcgctcgaccacaatcgcttgcatcacgcc
tacctcttcaccggtacccgaggcgtgggtaaaaccacgatcgcgcggattttagccaag
tgcttgaattgtgaaaccggggtcagctccgagccctgtggtaaatgcggcgcctgtatc
gaaattgccgagggccgctttgtcgacttgattgaagtggatgccgccagccgcaccaaa
gtggaagacacccgcgagctgctggaaaatgtccagtacgccccgtctcgcggtcgctac
aaggtctacctgatcgatgaagtgcacatgctctccaccagcagtttcaatgccctgttg
aaaaccttggaagagccgccaccgcacgtgaagtttctgctcgccaccaccgacccgcaa
aaattgccggtgacggtgttgtcgcgctgtctgcagtttaatttaaagaacatgaaccct
gagcgcatcgttgggcacttggcgtttgtgttggaaaaagagttggtgccctgcgaagat
gccgcactctggcagctcgggcgcgccgccgatggcagtatgcgcgatgccttatcgctc
accgatcaggccatcgccttcggtaacggtaaagtgactgaggccgatgtgcgcgccatg
ctcggcactatcgatcagcagtttgtctatgccattttgcaggccatagcgaccgccgac
ggccaagccatcttcaatgccgtgaatcaattggccgagcaggcgccggattaccaaggc
gcgctggctgaactactctcggtgctgcaccgcatcgccatcgcgcaggccctgcccgcg
gccatcgacaacagttttggcgaccgcgaacaggtgctggatttagcggccaaaattccc
gccgaagacattcaactgttctatcaaacggcgctgcttgggcgccgagatttacccttg
gcacccgacccgcgctccggcttcgatatggtgctgctgcgcatgctggcgtttaagccg
cagggtgttgccgatctaccgaaggcggcgctcggcgcaccggcagcgggcacgcctgct
gcagcgatgccagccacaccggcggagtcgccagcaaccgataaatcggtcgcgccagcg
cctagcgccggtgcccctagcacgcccgagcaggcaaaagccctggttgcagcgcaggtt
gagccagcgccagtgaccgcatcaacggtgtctactgcaccggcgccgaattcaacgtct
ggcagtgaggctaatccaacgtcaactaacccagcggccgtggcagatagtccgccttgg
gatgacgatgatcacgctgcgtcaaacttgtatgccgatgaagacgcgggttctgaaccc
ctgtccacgtcagcgcaagcgcctacagcaccccagccggtacaggcagtcgctagctcg
gttctggctccaagcgttgaagccccggtagcggcgtctacaccggtagtgccggcgccc
gccgtggttgacgttaaacctgcgattcaaccgctgccgtcacctgttgccaatacgccg
caaccgccagcccacgcgctgcccctagataaccaaaccggccgggctgcacctgctgtt
gatgttaacccaagcaaggcgcaggtttcgcaagctcaactagccgaggcggttcacagt
taccatctggtgaccttgaaacccagtgattggcaaggtttatacctcgagctgaaaata
ggtggggtgttgcaaagcaccgcggctaacagtcaattggtggcggtagaagataatcgc
ttgcgttttgtgctggatcaagccaatgccaatttatttgatgtgggccatcaatcgcgt
ctggccgatcaattaacggcttacttcaacgagccggtattggtagacattagccccggt
gagttaaccgctgaaacgccggcggcaactgcggtgcggttaaaagccgagcgcgcggcc
agtgcgttaaacagtttacaaaccgatccgttattgcaaaaactggagcgggaatttcaa
gccagtttagatatcaatacggtagaacctttgtag
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