Simiduia litorea: R50072_12470
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Entry
R50072_12470 CDS
T10759
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slio03016
]
R50072_12470 (truD)
Enzymes [BR:
slio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
R50072_12470 (truD)
Transfer RNA biogenesis [BR:
slio03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R50072_12470 (truD)
Prokaryotic type
R50072_12470 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BFM11094
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All DBs
Position
1421365..1422333
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AA seq
322 aa
AA seq
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MTEPSTFSIDFPFAYGKPAVSAKFRTECEDFVVNEILGFEASGDGEHVVLEVLKRDDNTP
WVAKQIARIAGVKPMDVGYCGLKDRRAVTRQWFSVYLPKPKAIDWRLLNGDTIQYLSHTQ
HNKKLRRGEHAANQFIIRLRDVQGDTDGIEQRLLAIKKGGVPNYFGEQRFGREQANLHQV
DELFSRRVRNKNPQQKGMVLSAARSWVFNQVLAARVAHADWQALLDGEPQPYASGPLWGR
GRNLATGLLGEFEADVLTPWQAWCDGLEHAGLSQERRALVQTPIDFAWRWEGQHLVLEFS
LAPGQFATSLLREIADLELVEE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagccctctacgttttcgattgatttcccctttgcctacggtaaaccagcggta
agcgccaagtttcgtaccgagtgtgaagatttcgtggtaaatgagatcttagggtttgag
gcatccggtgatggtgagcacgttgtgttggaagtgttaaagcgcgacgacaatacgccg
tgggttgccaagcagattgcccgtatagctggggtaaagccaatggatgttggctactgt
ggcttgaaagatcgtcgcgcggttacgcggcaatggtttagtgtttatttgcctaagcca
aaagccatagattggcgactgctcaacggcgataccatccaatatttgtcacacacacag
cacaataagaaattacgtaggggggagcacgcggcgaatcaatttattattcggctgcgc
gatgttcagggcgatactgacggtatagagcagcgattgctcgctataaagaagggtggc
gtgcccaactactttggcgagcagcgctttggtcgggagcaagcgaatttacatcaggtt
gatgagttgttttcccgccgggtgcgcaataaaaacccgcaacaaaagggcatggtttta
tcggccgctcggagctgggtatttaatcaagtattggctgctcgcgtggcgcatgcggat
tggcaggcattgcttgacggcgagccgcagccctatgccagtggtccgctttgggggcgc
ggccggaatctggcaacaggtctattaggtgagtttgaagcagatgttttgacgccttgg
caggcttggtgcgacggcttggagcatgcgggcttgagtcaagagcgtcgggcgctggtg
caaacgccgatcgattttgcttggcgctgggaggggcagcacttggtgcttgaatttagt
ttagcaccgggccagtttgccacctcgctgttacgtgaaattgctgatttagaactcgta
gaagaataa
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