Simiduia litorea: R50072_12520
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Entry
R50072_12520 CDS
T10759
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
slio Simiduia litorea
Brite
Enzymes [BR:
slio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
R50072_12520
Transfer RNA biogenesis [BR:
slio03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
R50072_12520
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NCBI-ProteinID:
BFM11099
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Position
complement(1426232..1428202)
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AA seq
656 aa
AA seq
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MLDISALQQLSQLKQTIRDNRDIATGTVRGTQSRFGFVHLDDGRDAFLAPEQMDRVLPGD
RVEVIVNEISDGKQSGKFEANLEQLIESPLKQFVGKYVVRGQGHFVAPDLPQLSRWIFLP
PKARKHAAPGDYLLCSIQQHPFHSQGKAQAGVDLNLGSDDSAGIETKYMCAKFDIPFNAV
KLHTDNNLEAERIHQSLVNANAGDTDWQDLTALDFVTIDSANTQDMDDAIHIDDAENGGV
IIRVAIAQPSSVIPDSSEILATARQLANTLYFPGNHQTMLPEILSHQSLSLIEGAIRRAL
VVKMHFDQTGAMGEVTFERANIQSKGRLNYQQVANYLRGEKAALNPSHHTCIDALFHWSA
IRREWRAANTLIMDDRADYEFELTDTQKIAAIHILARTPAHQIVEEAMLAANIAAGEFFA
RENLPGIFSTHAGPKPERLETLQQMLADQPEASLDANTLEGYVALVKGLESRNEQRLLSN
FRRQLQPGQLRLEAEPHLGLGFKHYATITSPIRRYHDLYNQQVICGWLANQSYASASPEV
VTALQLAIGKGRQAVKQAESWLVCQYLQGFIGQEFTGQISMVNSAGVGVRLDANGAEGFV
LVRNRECKPAFDPIALTLTISNPEGVDTVLHLDANVKVKLDSIESDTRKINFSLVG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatatatcagccctgcagcaattatcgcagctgaaacaaacaattcgcgacaac
agagacatagcaacaggcaccgttcggggcacgcaatcgcgctttggttttgtccattta
gatgatgggcgagatgcattcttagcgcctgaacaaatggaccgcgtattgcccggtgat
cgtgttgaagtcattgttaacgaaatcagcgatggcaaacaatccggcaaatttgaggcc
aacctcgagcaactcattgagtcgccacttaagcaatttgtcggtaaatatgtggtgcgt
ggccaaggccactttgttgcacccgacctaccgcaactcagccgttggatttttttacca
cccaaagcgcgcaaacatgcagcgcccggcgattacctactttgcagtatccagcaacac
ccttttcatagccaaggcaaagcacaagcgggtgttgatcttaatttaggttccgatgac
agtgccggcatcgaaaccaaatatatgtgtgcaaaatttgatattcccttcaatgcagtc
aagctgcatacagacaataatcttgaagcggagcgcatccatcaatcattggttaatgcc
aacgccggtgacacagactggcaagacctaacggcattggatttcgttaccatcgattct
gcgaatacccaagatatggatgacgccatccacattgacgacgcagaaaatggcggcgtt
attattcgcgtggctattgcacagcccagcagcgtcattccagacagcagtgaaatttta
gcgaccgcgcgtcagctcgccaacacgctctatttccccggcaaccatcaaacgatgctg
ccagaaatactatctcatcaaagcttatctctgatcgaaggcgccattcgtcgggccttg
gttgtaaaaatgcacttcgatcaaaccggtgcaatgggcgaggtcacattcgagcgggcc
aacattcaatccaaaggccgattaaactatcaacaagtggccaattatttacgcggagaa
aaagctgcgctcaaccccagccatcatacgtgtatcgatgcgctctttcactggagcgca
ataagacgcgagtggcgagcagcgaatacgctgattatggatgatcgcgccgactatgaa
tttgaactcacggacacgcaaaaaattgccgctatacatattcttgctcgcacccccgcg
catcagattgttgaagaggccatgctggccgcaaatatcgccgctggcgaattttttgct
cgtgaaaacttaccgggcatcttctccacccacgcaggcccaaaacccgaacgattagaa
acgcttcaacagatgcttgccgatcaacccgaggcatcgttagacgcgaataccttagag
ggctatgtcgccttggtgaaaggtttggagtcgagaaacgaacagcgactactgtctaat
ttcaggcgccaactgcaacctggccaactgcgcttggaagcagagccacacttaggttta
ggctttaaacactacgccaccattacctcgcctatccgtcgatatcacgacctgtacaac
caacaggttatttgtggctggttagcaaaccaatcctacgctagcgcctcaccagaagta
gtcacagcgctacagctagctatcggcaaaggccgacaagccgtcaagcaagctgagagc
tggctggtttgccaatacttacaaggttttatcgggcaggagtttaccggccaaatcagt
atggttaacagcgcaggcgtgggtgttcgtctcgatgccaatggtgctgaaggcttcgtg
ttagtgcgcaatcgtgaatgtaaaccagcctttgaccccatcgcactcacgctaaccatc
agtaaccctgaaggggtagacactgttttacatctcgatgccaatgtcaaagtcaaacta
gactcgatagaaagcgatacccgaaaaataaacttttcgttagtgggctag
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