Simiduia litorea: R50072_12990
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Entry
R50072_12990 CDS
T10759
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slio03009
]
R50072_12990 (der)
Ribosome biogenesis [BR:
slio03009
]
Prokaryotic type
GTPases
R50072_12990 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
AAA_22
ABC_tran
Ras
SRPRB
Roc
AAA_24
ATP_bind_1
TniB
NTPase_1
Arf
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
BFM11146
LinkDB
All DBs
Position
1478767..1480320
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AA seq
517 aa
AA seq
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MIPVLALVGRPNVGKSTLFNCLTRSRDALVADYAGLTRDRKYGEGDFEDRKFMVIDTGGI
SGEEEGIDSVMAGQSLQAIEEADAVLFIVDCRAGLTPADAMIARHLRVRNKPTFVVANKV
DGTNPDIALAPFHEMGLGELFATTATHRKGVKALMDHVMGQFPDEEVENPDLPTGIKIAV
VGRPNVGKSTLVNRLLGEDRVVVFDQPGTTRDSVYINYERHGSNYTLIDTAGIRRRKNVK
ETVEKFSIVKTLQAIEDANVVVLMADASEGLVDQDLHLMGHTIDAGRALVIALNKWDGLE
DTQKDYVKKELERRLRFIDFADTHFISAKHGTGVGHLYESIERAFKSATDKFSTNFLTRL
LQDAVREHQPPLVRGHRIKLRYAHPGGHNPPIIVIHGNQTTDLPAAYVRYLEKMFRRALD
LHGTPIRLEFKTSDNPFGDKPKAATRHRDGKLQTGKRQAGENRRTYLVRKGAEKPKPSTK
PEAKHSAAKAAAKTKASAKKAPAKPTHRTKPTGGKSR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtattagcccttgtcgggcgtcccaacgtgggaaagtcgacactctttaat
tgccttacgcgatcgcgcgatgcgctcgtggcagattacgctgggctaaccagggaccgt
aaatacggtgaaggtgactttgaagaccgcaagttcatggttattgataccggtggtatc
agtggcgaggaagagggcatagacagcgtgatggctgggcaatcgttgcaagccattgaa
gaggctgatgcggtattgttcattgtcgattgtcgagccggcctaacccctgccgacgca
atgattgcgcggcatttgcgcgtgcgcaataagccaacgtttgttgttgctaacaaagtt
gatgggactaacccagatattgcactcgcgccttttcatgaaatgggtttgggtgagcta
tttgccaccaccgcgacgcatcgcaaaggtgtgaaggcgttgatggatcacgtcatgggt
caatttcccgacgaggaagttgagaatcccgatttgcctaccggcataaaaattgcggtg
gtagggcgcccgaacgtgggtaagtccaccttggttaatcgacttctgggcgaggatcgc
gtggtggtttttgatcagcctggcactacccgcgatagcgtctacatcaattatgaaaga
cacggttctaactacaccttaattgatacggcgggtattcgtcgccgtaaaaatgttaag
gaaaccgtggaaaagttttctatcgtgaaaactctgcaggcgatcgaagacgctaacgtg
gtggttttgatggccgatgccagcgagggcttggtggatcaagatcttcacctgatgggc
cacaccattgatgcgggtcgtgcactggtgatcgcattgaataagtgggatggactcgaa
gacactcagaaagactatgtcaaaaaagaattggagcggcgtctacggtttatcgatttt
gccgacacccatttcatttctgcaaaacacggtaccggtgttggtcacttgtatgagtct
atcgagcgcgcgtttaaatcggcgaccgacaagttttcaaccaacttcttaacgcggtta
ctgcaagatgcggtgcgcgagcatcagccgcccttggtgcgtgggcatcgtatcaagttg
cgctacgcgcaccccggtggtcacaaccccccgattattgtcattcacggcaaccaaacc
acggatctgccagcggcttatgttcgctatttagagaagatgtttcggcgtgcgctagat
ctgcatggcacgcctattcggctggaatttaaaaccagcgataaccccttcggcgataag
ccgaaagcggcaacgcgccatcgcgatggcaagctgcaaacaggcaagcgccaagcgggc
gagaatcgccgcacctacttggttcgtaaaggtgctgaaaagccgaagccgtcaactaag
cctgaagcaaaacacagcgctgccaaagccgcggcgaagacaaaagcaagcgcaaagaaa
gcgccggcaaaaccgacccacagaactaagccgacgggtggtaagtcgcgttag
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