Simiduia litorea: R50072_13290
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Entry
R50072_13290 CDS
T10759
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
slio Simiduia litorea
Pathway
slio00030
Pentose phosphate pathway
slio01100
Metabolic pathways
slio01120
Microbial metabolism in diverse environments
slio01200
Carbon metabolism
Module
slio_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
R50072_13290 (edd)
Enzymes [BR:
slio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
R50072_13290 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
BFM11176
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Position
1526439..1528295
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AA seq
618 aa
AA seq
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MTSEATTKLNPVVAKVTATIIERSRATRTDYLARMEAQAEQGPHRKTLPCGNLAHGFAAC
GTTDKELLAQSDVANIAIVSSYNDMLSAHQPFEDTPKAIKKVIAAKGSVAQFAGGVPAMC
DGITQGMPGMELSLFSRDVIAMSTAIALSHNMFDGALCLGVCDKIIPGMLIGALSFGHLP
MIFIPAGPMPSGLPNDEKARVRQLFAQGKVGREELLAAESASYHSAGTCTFYGTANSNQL
LMEIMGLHLPGSSFINPNTPLREALTAAASEQVLNLVKSGSDYRPLAKIVDEKAIVNAVV
GLVATGGSTNHTMHLVAMAAAAGIVLTWDDFSALSAVIPSLTKIYPNGVADINHFQAAGG
MSFLIATLLDAGLLHADVLTVHSEPGLQAYRTEPQLREGKLAWADGPTESLDTSVLRAAT
DPFSADGGLKVLKGNLGRGVIKTSAVKEEYRVQEAPAIIFQSQAEFISAFQQGLLEKDFI
AVLRYQGPRANGMPELHKLVPILGSLQDKGFKVGLVTDGRMSGASGKVAAAIHVTPEAAA
GGVIGKIQSGDVVRLDATTGELNVLVDQAVLDARIVAMPDLSANQTGCGRELFAALRNQV
TGAATGARSFDLTVNEDL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgaagcaacaactaagctcaaccccgtagtggccaaagtgaccgctaccatt
atcgaacgtagtcgcgctacgcgaaccgattaccttgcccgtatggaagcccaagccgag
caggggccgcaccgtaaaacactgccttgtggcaaccttgcccatgggtttgccgcctgc
ggtaccacagataaagagctgctggcgcagtctgatgttgccaacattgccattgtttcg
tcctacaacgatatgttgtcggcgcaccaacccttcgaagatacgccaaaagcgattaag
aaagtgattgccgctaagggtagtgtggctcagtttgccggtggtgttccggctatgtgt
gacgggattactcaaggcatgccaggcatggagttgtcgctgttttcgcgcgatgttatc
gccatgtcaaccgccattgccctgtcgcacaacatgtttgatggcgctttgtgtttgggt
gtttgcgataaaattattcccggtatgctgattggcgctttatccttcggccacttgccg
atgatttttattcctgcgggacccatgccatcggggttgcccaatgacgaaaaagctcgg
gttcgacagttgtttgcccaaggcaaagtagggcgcgaagaattattggcggcggagagt
gccagctatcattctgcgggcacctgtacattttacggcaccgcaaactctaaccagttg
ttgatggaaatcatggggctgcacctgcctggcagttcgtttatcaaccccaacacgcct
ttgcgcgaagccttaaccgcagccgcaagtgagcaagtgttaaacttagttaagagcggt
tcggactatcgcccactggcaaaaattgttgatgaaaaagccattgttaacgctgtggta
ggtttggtggcaaccggtggttcaaccaatcacaccatgcatttagtggccatggcggcg
gcggcaggtattgttttaacctgggatgacttctcagcgctatcggcggtgattccgtca
ctcaccaaaatttaccctaacggcgtggctgatattaaccacttccaagctgcgggtggc
atgtcatttttaatagcaacgctgttagatgcaggtttgttgcatgccgacgtactcacc
gttcacagcgagccaggcttgcaggcttatcgcaccgaaccgcaactgcgcgagggtaaa
ttggcttgggctgatggcccgacagaatctctcgataccagtgttttgcgcgccgcgaca
gacccgtttagcgccgacggcggtttaaaagttctcaagggtaatttaggtcggggtgtg
attaagacctctgcggtgaaagaggagtatcgcgtgcaggaagcgccggcgattattttc
caaagccaggccgaatttatttctgcctttcagcagggcttgctggaaaaagattttatc
gctgtgctccgctaccaaggaccgcgtgccaatggtatgccagagttacataagttagtg
cctattctgggtagcttgcaagataagggcttcaaagttggattggttaccgatggtcgc
atgagtggcgcatcgggcaaggtggctgcggccattcatgtcacgccagaagccgcggcc
ggcggtgttatcggtaaaattcaaagtggtgatgtagtgcgtttggacgcaaccactggc
gaattaaatgtactggttgatcaagccgtattagacgcacgtattgtggctatgccggat
ttatccgcgaatcaaacaggttgcggcagagagttgttcgcggctctgcgcaatcaagtg
accggtgctgccacaggcgctcgtagttttgatttgacggtaaacgaggacttgtga
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