Simiduia litorea: R50072_19340
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Entry
R50072_19340 CDS
T10759
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
slio Simiduia litorea
Pathway
slio00521
Streptomycin biosynthesis
slio00523
Polyketide sugar unit biosynthesis
slio00525
Acarbose and validamycin biosynthesis
slio00541
Biosynthesis of various nucleotide sugars
slio01100
Metabolic pathways
slio01110
Biosynthesis of secondary metabolites
slio01250
Biosynthesis of nucleotide sugars
Module
slio_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
R50072_19340 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
R50072_19340 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
R50072_19340 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
R50072_19340 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
R50072_19340 (rfbB_1)
Enzymes [BR:
slio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
R50072_19340 (rfbB_1)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NmrA
Motif
Other DBs
NCBI-ProteinID:
BFM11781
LinkDB
All DBs
Position
2192941..2194056
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AA seq
371 aa
AA seq
DB search
MPSSRLNVLVTGGAGFIGANFVHFWLEKNPQAKLIVLDALTYAGNRSSLAKWESRSNFQF
VQGNICDQPLVESLLLKHDIDVLVHFAAESHVDRSIPSPDAFIEANIMGTFSLLKAAKAI
WLDKPAAAGLSAKAHRFHHVSTDEVYGTLAAGDSAFTEQSTYAPNSPYAASKAASDHLVR
AYQQTYGLQVSSSNCSNCYGPFQFPEKLIPLIITNILHNRPIPLFGDGQQIRDWLYVEDH
VRAIELILQGDITGQRHNIGGENEWKNLDLVKYICCKMNQLFQAKPELSQQFPTALAARN
NESEKLITHVSDRAGHDRRYAVNINRATEDFGYRPSETFDTGIQRTLEWYLANQDWWQPL
LPETAGGREIS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcttcgcgccttaacgtattagtcaccggtggtgcaggttttattggtgcgaat
ttcgtacatttttggttagaaaaaaatcctcaggcgaagctaattgttttagatgctcta
acctatgcgggtaaccggtctagcttggctaaatgggaatcccgctcaaactttcaattc
gtgcaaggcaatatatgtgaccaaccgttggttgagtcactgttactcaagcatgacatt
gatgttttagtgcactttgccgctgagtcccacgtcgatcgatctatacccagccccgat
gcctttattgaagcaaatatcatgggcacgtttagtttactcaaggcggcgaaagccatt
tggctagacaaacccgcagcggcggggttgtcggcgaaagcgcatcgatttcatcacgtt
agcactgatgaggtttacggcacattggcagcaggtgactcggccttcaccgagcaatca
acttacgcccctaactcaccttacgcggcgagtaaggcggcatcggatcacttagtgaga
gcctaccagcaaacctatggacttcaggtttcttcatcaaactgctcaaattgctacggg
ccgtttcaattccctgaaaaattgatacctttaatcattaccaacattttacataacagg
ccaatcccgctatttggcgacggtcaacagattcgagattggttatacgtcgaggatcat
gtacgcgctatcgagctgattctacagggcgacatcacaggccagcgccacaatatcggc
ggcgaaaatgagtggaaaaatcttgacctagtgaaatatatttgctgcaagatgaaccaa
ttgttccaggctaagcccgagctgtcgcaacaatttccgacggcgcttgcagccaggaac
aatgaatcggaaaagttgattacccatgtcagcgatcgcgccgggcacgatcggcgatat
gccgtaaacattaacagagcaacagaagatttcggctataggccctcggaaactttcgac
accggcatacagcgaacgctcgagtggtatttggcgaatcaggattggtggcaacccttg
ttgcctgaaacggcaggtggccgcgaaatctcatga
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