KEGG   Simiduia litorea: R50072_19340
Entry
R50072_19340      CDS       T10759                                 
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
slio  Simiduia litorea
Pathway
slio00521  Streptomycin biosynthesis
slio00523  Polyketide sugar unit biosynthesis
slio00525  Acarbose and validamycin biosynthesis
slio00541  Biosynthesis of various nucleotide sugars
slio01100  Metabolic pathways
slio01110  Biosynthesis of secondary metabolites
slio01250  Biosynthesis of nucleotide sugars
Module
slio_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:slio00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    R50072_19340 (rfbB_1)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    R50072_19340 (rfbB_1)
   01055 Biosynthesis of vancomycin group antibiotics
    R50072_19340 (rfbB_1)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    R50072_19340 (rfbB_1)
   00525 Acarbose and validamycin biosynthesis
    R50072_19340 (rfbB_1)
Enzymes [BR:slio01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     R50072_19340 (rfbB_1)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD NAD_binding_4 Polysacc_synt_2 RmlD_sub_bind NmrA
Other DBs
NCBI-ProteinID: BFM11781
LinkDB
Position
2192941..2194056
AA seq 371 aa
MPSSRLNVLVTGGAGFIGANFVHFWLEKNPQAKLIVLDALTYAGNRSSLAKWESRSNFQF
VQGNICDQPLVESLLLKHDIDVLVHFAAESHVDRSIPSPDAFIEANIMGTFSLLKAAKAI
WLDKPAAAGLSAKAHRFHHVSTDEVYGTLAAGDSAFTEQSTYAPNSPYAASKAASDHLVR
AYQQTYGLQVSSSNCSNCYGPFQFPEKLIPLIITNILHNRPIPLFGDGQQIRDWLYVEDH
VRAIELILQGDITGQRHNIGGENEWKNLDLVKYICCKMNQLFQAKPELSQQFPTALAARN
NESEKLITHVSDRAGHDRRYAVNINRATEDFGYRPSETFDTGIQRTLEWYLANQDWWQPL
LPETAGGREIS
NT seq 1116 nt   +upstreamnt  +downstreamnt
ttgccttcttcgcgccttaacgtattagtcaccggtggtgcaggttttattggtgcgaat
ttcgtacatttttggttagaaaaaaatcctcaggcgaagctaattgttttagatgctcta
acctatgcgggtaaccggtctagcttggctaaatgggaatcccgctcaaactttcaattc
gtgcaaggcaatatatgtgaccaaccgttggttgagtcactgttactcaagcatgacatt
gatgttttagtgcactttgccgctgagtcccacgtcgatcgatctatacccagccccgat
gcctttattgaagcaaatatcatgggcacgtttagtttactcaaggcggcgaaagccatt
tggctagacaaacccgcagcggcggggttgtcggcgaaagcgcatcgatttcatcacgtt
agcactgatgaggtttacggcacattggcagcaggtgactcggccttcaccgagcaatca
acttacgcccctaactcaccttacgcggcgagtaaggcggcatcggatcacttagtgaga
gcctaccagcaaacctatggacttcaggtttcttcatcaaactgctcaaattgctacggg
ccgtttcaattccctgaaaaattgatacctttaatcattaccaacattttacataacagg
ccaatcccgctatttggcgacggtcaacagattcgagattggttatacgtcgaggatcat
gtacgcgctatcgagctgattctacagggcgacatcacaggccagcgccacaatatcggc
ggcgaaaatgagtggaaaaatcttgacctagtgaaatatatttgctgcaagatgaaccaa
ttgttccaggctaagcccgagctgtcgcaacaatttccgacggcgcttgcagccaggaac
aatgaatcggaaaagttgattacccatgtcagcgatcgcgccgggcacgatcggcgatat
gccgtaaacattaacagagcaacagaagatttcggctataggccctcggaaactttcgac
accggcatacagcgaacgctcgagtggtatttggcgaatcaggattggtggcaacccttg
ttgcctgaaacggcaggtggccgcgaaatctcatga

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