KEGG   Simiduia litorea: R50072_22580
Entry
R50072_22580      CDS       T10759                                 
Symbol
tssC_1
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
slio  Simiduia litorea
Brite
KEGG Orthology (KO) [BR:slio00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slio02044]
    R50072_22580 (tssC_1)
Secretion system [BR:slio02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R50072_22580 (tssC_1)
SSDB
Motif
Pfam: VipB VipB_2 KCNQC3-Ank-G_bd DUF4335
Other DBs
NCBI-ProteinID: BFM12105
LinkDB
Position
2567857..2569347
AA seq 496 aa
MSTEAAVDSNAAEAGESTVSLLEQAIGHTKQTSREEAQDLISNLTQQVLQGTVSWDKNLT
HTISSAVKAIDAAMSKQISAIQHQEKLQKLEGSWRGLHHLVMNSETGKTLKIRVLNLSKR
ELFRDLDKAVEFDQSQIFKKMYEEEFGTAGGEPYGAMIGDFEFSNHPEDIELLTKMSNVA
AAGFCPFISAAGSEMMGFDSFTELSKPRDLGGIFESAEYIKWRSFRDSDDSRFVTLVMPR
VLSRLPYGASTKPVESFNYEEFEQDESGMSKSANHDDYCWMNASYVMGATLTKAFAENSW
CTAIRGAEGGGKVEGLPTHLFKSDDGDTDLKCPTEIGITDRREAELSNQGFLPLCHYKNT
DYSVFFGAQTAQKPKAYDNPDATANASISARLPYLMATSRIAHYLKVMARDKVGSFMEAS
DCERWLNKWIAQYTNSNPEASAEMKAKYPLAEARVEVKEIPGQPGSYSAIAYLKPWLQME
ELTTSMRMVANIPTPS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagtacagaagcggcagtcgacagcaatgcagcagaagccggcgaatcaaccgttagc
ctgcttgagcaagccataggccacacaaagcaaacctcacgagaagaagctcaggatctg
atcagtaatttaacccagcaagtcctgcagggcacggtatcttgggataaaaatttaact
cataccattagctcagctgttaaagccattgacgctgcaatgtcaaagcaaatcagtgca
attcagcatcaagaaaaattacagaagttagagggttcatggcgcggtcttcatcaccta
gtgatgaatagtgaaacaggaaagacacttaaaatacgtgttttaaacctgtctaagcgc
gaactattccgcgacctagataaagcggtcgagtttgatcaaagtcaaatcttcaaaaaa
atgtacgaagaggaattcggtaccgcaggtggcgaaccttatggtgcaatgattggcgat
ttcgagttcagcaatcatcctgaagatatcgaattgctgaccaaaatgtctaacgttgca
gccgctggtttctgtccgttcatttctgctgcaggctcagaaatgatgggttttgacagt
ttcactgagctttcgaaaccacgtgatcttggaggcatatttgaatcggcagaatatatt
aagtggcgcagcttccgcgatagcgatgactcccgcttcgtcacgctagttatgcctcgc
gtgctgtctcgcctgccttatggtgcgagcaccaaacccgttgaatcctttaattatgaa
gaatttgagcaagatgaatcaggcatgtccaagtcagcaaaccatgatgactactgctgg
atgaacgcctcttatgtcatgggcgcaacgttaacaaaggcatttgctgaaaactcttgg
tgcacagcgatccgcggtgctgagggtggcggtaaagttgaaggtttaccgactcatttg
tttaagagcgatgacggcgacacggatcttaaatgtcccactgaaatcggcattaccgac
cgaagagaagccgaattatcgaaccaaggctttctcccattgtgtcattataaaaacact
gactactcagtgtttttcggcgcccaaaccgctcagaagccaaaagcttatgacaaccca
gatgcgaccgctaatgcatctatttcagcgcgcctgccttatctgatggctacttcacgc
atcgctcattacctcaaagtaatggctcgcgacaaagtaggctcgttcatggaggcttca
gattgcgagcgctggttgaacaagtggattgctcagtataccaactcaaacccagaagca
agtgcggagatgaaagccaagtaccctctcgccgaagcacgcgtagaagttaaagaaatt
ccaggccagcccggttcatatagcgcaattgcctatttgaaaccttggctacaaatggaa
gaactgacaacctccatgcgtatggttgcaaacatcccaacgccaagctaa

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