Simiduia litorea: R50072_23170
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Entry
R50072_23170 CDS
T10759
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
slio Simiduia litorea
Pathway
slio00250
Alanine, aspartate and glutamate metabolism
slio00310
Lysine degradation
slio00350
Tyrosine metabolism
slio00650
Butanoate metabolism
slio00760
Nicotinate and nicotinamide metabolism
slio01100
Metabolic pathways
slio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
R50072_23170 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R50072_23170 (gabD)
00310 Lysine degradation
R50072_23170 (gabD)
00350 Tyrosine metabolism
R50072_23170 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
R50072_23170 (gabD)
Enzymes [BR:
slio01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
R50072_23170 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
R50072_23170 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
R50072_23170 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BFM12164
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Position
complement(2638463..2639926)
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AA seq
487 aa
AA seq
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MLALKNPALLRGQSYINGQWVDSDNGETVPVLNPSTGATLIDIASCGVDETRRAIAAAEA
AMPAWAGKPAKERANILRVWYNLILANLDDLSLILTAEQGKPLAEAKGEIIYGANYIEWF
AEEAKRVYGDIIPAPSGDKRVVVVKQPVGVVASITPWNFPNAMITRKAAPALGAGCTFVG
KPATETPLSALALAVLAEQAGIPAGVFNMVCGKSSRAIGGEMTSNPSVRKVTFTGSTPVG
KVLMAQCAETVKKTSMELGGNAPFIVFDDADLDAAVKGAVASKYRNAGQTCVCSNRMLVQ
ASIYDAFTDKLAAAVKELKMGDGQQAGINLGPMINNKAANDVDAMVQDALEKGAVAKLGG
KKSSLGACFYEPTILTSVSTDMRVFSEEIFGPVAPIFKFEDEAEAIKMANDTEFGLAAYF
YTRDIGRVWRVGEALEYGIVGINEGIISNEMAPFGGVKESGSGREGSKYGMDDYLEIKYM
CMGGLDK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgttgaaaaatccggcattgttgcgcggccagtcatacattaatggccagtgg
gtcgatagtgataatggcgagacggttccggtattgaacccatcgacgggcgccaccctt
atcgatattgccagctgcggtgtcgatgaaacacgccgcgccattgccgccgccgaggcg
gccatgccagcctgggccggcaagcccgccaaggagcgcgccaatattttacgcgtttgg
tataacttgattttggctaacctcgatgacctgtcgttgattttgacggcggagcagggc
aagcccttagccgaggccaagggtgaaattatttacggcgctaattacatcgagtggttc
gcggaagaagctaagcgagtttatggcgacatcattcccgcgccctccggcgacaagcgc
gttgtggtggtgaagcagcccgtgggtgtggtggcttctattacgccttggaatttcccc
aacgccatgattacccgtaaagcggcaccagcattgggtgccggctgtaccttcgtaggt
aaacccgcaacagaaacacctttgtcggcactggcgctcgccgtgctcgccgagcaagcg
ggtattcctgccggtgtgtttaacatggtgtgcggcaaaagttctcgcgctattggcggt
gaaatgaccagcaatcccagcgtgcgcaaagtgacatttaccggctccaccccagtgggt
aaagtcctgatggcccagtgtgcagaaacggttaagaaaacctccatggagctgggtggc
aatgcaccattcatcgtgtttgacgacgccgatttagatgccgcggtgaagggcgctgtg
gcctctaaatatcgcaacgccgggcaaacctgtgtttgctccaaccgcatgctggtgcag
gcaagtatttacgacgcttttaccgataagttagccgccgcggtaaaggagctaaaaatg
ggtgatggccagcaggccggtattaatcttggccccatgattaacaataaagcggctaac
gatgtcgatgccatggtgcaagatgcactggaaaaaggtgctgtggcgaaactcggcgga
aagaaatcgagcttaggtgcgtgtttctacgagcccactattttgaccagcgtcagcacc
gatatgcgtgttttcagtgaagaaatttttggccctgtggcgccgatttttaaattcgaa
gatgaagccgaagcgattaaaatggccaacgataccgagtttggtttagcggcttacttt
tatacccgcgatatcggtcgcgtatggcgcgttggtgaagccttggagtacggcattgtc
ggtattaacgaaggtattatttccaacgagatggcacctttcggtggcgtaaaagaatcg
ggctcgggtcgcgagggttcaaagtacgggatggacgattatttagaaattaaatacatg
tgtatgggtggtttagataaatag
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