Simiduia litorea: R50072_24610
Help
Entry
R50072_24610 CDS
T10759
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slio03400
]
R50072_24610 (phrB)
Enzymes [BR:
slio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
R50072_24610 (phrB)
DNA repair and recombination proteins [BR:
slio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
R50072_24610 (phrB)
Prokaryotic type
R50072_24610 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BFM12308
LinkDB
All DBs
Position
complement(2811049..2812473)
Genome browser
AA seq
474 aa
AA seq
DB search
MNQLVWFRADLRVHDNRALRSAWSRAKTSGGKVYAVFLISQTQWQGHNLGLPKRDFIARQ
LVELSTSLASHDIELVLLEAPRFDDAPAVLMKFAKENNISDAHWQVEFGWDERQRDKRVS
TSLQNQGVELHVNQDRCLVNPDQVLTLSGTAYKVFSAFKKNWLSLLMSQWQAPKVKGESK
TRSKQVRVPLQVDALYTGAESAEDCQHLQTLWPAGEEEAQRRLYQFLSESVRDYQLQRDF
PAVEGTSSLSPYLAAGVIGPRQCVTAWLNEAQGDWFDPSMQTWLNELAWRDFYHYVMWHF
PKVSKNLPFQDKTRAVQWRNAPEDFSLWCEGKTGVPIVDAAMAQLNQTGWMHNRLRMVVA
SYLTKNLFIDWRLGEAYFMQQLVDADFAANNGGWQWSASTGTDAAPYFRVFNPVSQSERF
DPDGEFIRTWLPELSHLSGKLIHSPRASERRGYPAPLVDLKVTRRLAIEAFASL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattagtttggtttcgcgcggatcttagagtgcatgataaccgagccttgcgc
tcagcttggtcgcgggcaaaaacgtccggtggaaaagtctacgccgtgtttctgattagt
cagacccagtggcaaggccataacctcggcttacctaagcgcgattttattgcgcgccag
cttgtcgaattatcgacgtcgctggctagtcatgatattgagttggtgttgctcgaggcc
cctaggttcgatgatgcaccagcggtgcttatgaagttcgctaaagaaaacaacatttca
gatgcgcactggcaagttgagtttggctgggatgagcgtcaaagagataagcgtgtgtcg
acctcgctgcaaaaccaaggtgttgagctacacgtcaatcaagatcgctgtttagttaat
cctgatcaagtgctcacgttatcgggcactgcctataaagttttcagcgcctttaaaaag
aattggttgtcgctgttaatgtcccaatggcaagcaccgaaagtgaagggcgagtcaaag
acccgatccaaacaggtgcgtgtacctctgcaggtagacgctctttataccggtgctgaa
agcgcagaagactgccagcacttgcagacattatggccagccggcgaagaggaggcacag
cgtaggctctatcagtttttgtctgagtccgttagagactaccagctgcagcgcgacttt
cccgctgtagaggggacgtcgtctttatcgccctatcttgccgcgggtgtgattggcccg
cgccagtgtgttactgcatggctcaatgaagcacagggtgattggttcgatccgtctatg
caaacctggctaaacgaattggcttggcgagatttttaccattatgtgatgtggcatttt
ccgaaagtgtcgaaaaaccttccctttcaagataagacccgggccgtgcagtggcgcaac
gctccagaggattttagcctgtggtgcgagggaaaaaccggcgttccgattgttgatgca
gctatggcgcaattgaatcaaactggctggatgcacaatcgcttgcgcatggtggtggct
agttatcttactaaaaatttgttcattgattggcgtctgggtgaagcttacttcatgcaa
caattagtcgatgcggattttgcggcgaataatggcggctggcagtggagcgcctcaaca
ggcaccgatgcagcaccttactttcgcgtgtttaatccagtcagccagtctgaacggttt
gatcccgacggtgagtttattcgcacttggctaccggagcttagccacctgagcggtaag
cttattcattctccgcgcgcttctgaaaggaggggatatccagcgcctttggtcgactta
aaggtaacacggcgattggcgatagaggcttttgcaagtctataa
DBGET
integrated database retrieval system
