Simiduia litorea: R50072_26420
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Entry
R50072_26420 CDS
T10759
Symbol
fadB_2
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
slio Simiduia litorea
Pathway
slio00071
Fatty acid degradation
slio00280
Valine, leucine and isoleucine degradation
slio00310
Lysine degradation
slio00362
Benzoate degradation
slio00380
Tryptophan metabolism
slio00410
beta-Alanine metabolism
slio00640
Propanoate metabolism
slio00650
Butanoate metabolism
slio00907
Pinene, camphor and geraniol degradation
slio00930
Caprolactam degradation
slio01100
Metabolic pathways
slio01110
Biosynthesis of secondary metabolites
slio01120
Microbial metabolism in diverse environments
slio01200
Carbon metabolism
slio01212
Fatty acid metabolism
Module
slio_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R50072_26420 (fadB_2)
00650 Butanoate metabolism
R50072_26420 (fadB_2)
09103 Lipid metabolism
00071 Fatty acid degradation
R50072_26420 (fadB_2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R50072_26420 (fadB_2)
00310 Lysine degradation
R50072_26420 (fadB_2)
00380 Tryptophan metabolism
R50072_26420 (fadB_2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R50072_26420 (fadB_2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
R50072_26420 (fadB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
R50072_26420 (fadB_2)
00930 Caprolactam degradation
R50072_26420 (fadB_2)
Enzymes [BR:
slio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
R50072_26420 (fadB_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
R50072_26420 (fadB_2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
R50072_26420 (fadB_2)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
R50072_26420 (fadB_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
HisG
Motif
Other DBs
NCBI-ProteinID:
BFM12489
LinkDB
All DBs
Position
complement(3022596..3024743)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYSGKAITVRALEQGIAELCFDLTDDSVNKFNQLTLNELREATAAITANGKVKGLLVTS
GKDGFIVGADITEFGANFTRSEEEIAAGVYETNKIFSAVEDLPFPTVTAINGVALGGGLE
MALATDFRVMADTAKIGLPEVKLGIMPGFGGTVRLPRVAGADNAIEWIAAGKEQRADKAM
ADGVVDAVVTGDKLREAGLDLLSRAISGELDYKTKRQEKLEKLKLNDMESLMVFETAKGF
VAGQAGKHYPAPVTAVKSMQKNSTLGRDEALKVEAAGIAKLAKTTVAASLVNLFLSDQML
MKKGKTQAKAAKKVEKGAVLGAGIMGGGIAYQSAYKGTPIMMKDIAQAGLDLGMGEAAKL
LSKMVERNRMTPGEMADVLTKITPTLSYEGIDTADVIVEAVVENPKVKHAVLAEVENHIR
KDAVLASNTSTISIDFLAQPLKRPENFCGMHFFNPVHKMPLVEVIRGAKTSDTAVAATVG
YALAMGKKPVVVRDCPGFLVNRILSPYMGCFMQMVHEGADFAAIDKVMEKFGWPMGPAYL
CDVVGIDTGVHAGEVMSNGFPDRMKYEFKTASELLYEAKRFGQKNNKGYYNYETDRKGRL
QKVADASVWDLLKGHVAERKEFSEEEISERLMVSLCLESVRCLEDNIVDSAMELDMALIY
GIGFPPFHGGAIRYMETVGLANFVAIADKYAHLGGLYQVTDKLRAKAAAGESYFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggaaaggcgattacggttcgcgcgttagagcagggcatagccgagcta
tgttttgatctgaccgacgactcagtcaataaattcaatcaattaacccttaatgagctg
agagaagcgacagcagccatcactgccaatggcaaggtaaaggggttattggtcactagc
ggtaaagatggctttatcgtcggtgcggatatcaccgaatttggcgccaatttcacccgt
tccgaagaagaaattgcggctggtgtgtatgaaaccaataagatatttagtgcggttgaa
gacttacctttcccgaccgttaccgccattaacggcgtagcactaggcggtggtttagag
atggcactggccaccgacttccgcgttatggccgacacggccaagatcggcctgcccgaa
gtgaagctcggcatcatgcctggttttggcggcaccgttcgcctgccacgtgtggccggc
gccgacaacgccattgaatggattgccgctggtaaagagcagcgcgccgataaggccatg
gccgatggtgtggttgatgccgtggttactggtgataaattgcgcgaagccggtttagat
ttactcagccgcgctatcagcggcgagttggattacaagactaagcgtcaggaaaaatta
gaaaaactgaagctgaacgacatggaatctttgatggtttttgaaaccgcgaaaggattc
gttgccggccaagcgggtaagcactacccggcgcccgtgaccgcggttaaatccatgcag
aaaaacagcacgctggggcgcgatgaggcgttaaaagttgaagccgccggcattgccaaa
ttggcgaaaaccaccgttgcagctagtttggttaacttgttcctttccgatcaaatgttg
atgaagaaaggtaaaacccaagctaaagcagcgaaaaaagttgagaagggtgccgtatta
ggcgcgggtattatgggcggcggtattgcctatcaatcggcctacaaaggcacgcccatt
atgatgaaagacatcgcgcaagcgggtctggatttgggcatgggcgaagcggctaagcta
ctgtcgaaaatggttgagcgcaaccgtatgacaccgggcgaaatggccgatgtgctaacc
aaaattacgccaacactgtcctatgaaggtatcgataccgctgacgttattgttgaagct
gtggtggaaaaccccaaagttaagcacgcggtcttggcggaagtggaaaaccatattcgt
aaagacgcggtgctggcttctaatacctcgactatctctattgatttcttggcgcagcct
ttgaagcgccccgaaaatttctgtggcatgcacttcttcaaccccgtgcacaaaatgcct
ttggtggaagtgattcgcggtgcaaaaacgtcagacacagcggtcgctgctactgttggc
tacgcactcgccatgggtaaaaagcccgttgttgtacgcgattgcccaggcttcctcgtt
aaccgcatcctgtcgccctacatgggctgtttcatgcaaatggttcacgaaggtgcagac
ttcgcggctatcgataaagtgatggaaaagtttggctggcccatgggccccgcttacttg
tgtgacgttgtcggcatcgacacgggtgttcacgctggtgaagtgatgagcaatggcttc
cctgatcgcatgaagtacgaatttaaaaccgcgagtgagttgttatacgaagccaagcgt
ttcggtcagaaaaacaacaagggctactacaactacgaaaccgatcgcaaaggccgctta
caaaaagttgctgacgcatcggtatgggacttgttaaaaggccacgttgctgagcgtaaa
gagtttagcgaagaagaaatttctgagcgcttgatggtgtctttgtgtttagagtctgtg
cggtgtttagaagacaacatcgtcgactctgccatggaattggatatggctttgatttac
ggcattggcttcccacccttccacggcggtgcaattcgctacatggaaactgtgggtctc
gctaactttgtagcgattgccgacaaatacgcgcaccttggtggtttgtaccaggtaacc
gacaaacttcgcgccaaggcagcagccggcgaatcttacttcgcctaa
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