Simiduia litorea: R50072_28720
Help
Entry
R50072_28720 CDS
T10759
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slio03009
]
R50072_28720 (rimO)
Enzymes [BR:
slio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R50072_28720 (rimO)
Ribosome biogenesis [BR:
slio03009
]
Prokaryotic type
ribosomal protein modification factors
R50072_28720 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Cellulase
Motif
Other DBs
NCBI-ProteinID:
BFM12719
LinkDB
All DBs
Position
complement(3267705..3269036)
Genome browser
AA seq
443 aa
AA seq
DB search
MSAKQPTVGFVSLGCPKALVDSERILTKLRLDGYEVAAEYQGADLVVVNTCGFIDSAKQE
SMDAIREAMAENGKVIVTGCMGKGSDAEAIKAANPGVLSVSGPADYDTVMNTVHQYLPNE
QMNPHRHDLVPPAGIKLTPSHYAYLKISEGCNHRCSFCIIPAMRGDLVSRPIPDVVQEAH
DLVSSGVQELLVISQDTSAYGIDVKFKLDLASGAETRMQDLAVALGEMGVWVRLHYVYPY
PHVDKIIPLMAEGKILPYLDIPFQHASPRILKLMKRPAHSEKVLGRIKKWRELCPDLTIR
STFIVGFPGETEEDFQMLLDFLEEAQLDRVGCFKYSPVDGATANELPDHVPEDVQQARWE
RFMETQQRISTARLQKKIGRIMPVIIDEVDDEGAIGRTQGDAPEIDGAVYLNDEFDVEPG
DIVLVEIEHADEYDLWGSVVELA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaaacagcccacagttggcttcgtttcgttaggttgtccaaaggccttagtc
gattccgagcgaatcctgactaagttgcgtttagatggctacgaagtggctgccgagtat
caaggtgccgatcttgtggtggtcaatacctgtggctttatcgactcagcgaagcaagag
tctatggatgccattcgcgaggccatggccgagaacggcaaagtgattgtgacgggttgt
atgggtaagggtagcgatgccgaggccattaaagccgccaaccctggcgtgctaagtgtt
agtggcccagccgattacgacacagtgatgaacaccgtgcatcaatacctgccgaacgag
cagatgaacccgcaccgccacgatttggtgccgccggcagggattaagctgacgccgagt
cattacgcctatcttaaaatttccgaaggctgcaaccatcgctgtagtttttgtattatt
ccggccatgcgtggcgacctagtcagccgacccattcccgacgtggttcaggaagcgcac
gacttggtgagcagtggcgtacaggaattattggtgatttcacaagacaccagcgcctac
ggcatcgatgtgaaatttaaattggatttggccagcggcgccgaaacccggatgcaagat
ttggctgttgcgctgggcgaaatgggtgtgtgggtgcgcttgcattacgtctacccttat
ccgcacgtggataagattattccattaatggcagaaggtaaaatcctgccctacttagat
attccctttcagcacgcaagcccacgtattctgaaattaatgaagcgcccggcgcacagc
gagaaagtgttgggccgcattaaaaaatggcgcgaactctgcccggatctcaccattcgc
tccaccttcattgtgggtttccctggcgaaacggaagaagatttccaaatgttgttggat
ttcctcgaagaagcacaactagaccgcgtgggttgctttaaatactcaccggtggatggc
gccaccgccaatgagttgcccgaccatgtgcccgaagacgttcaacaggcgcgttgggaa
agattcatggaaacgcagcagcgcattagcaccgcgcgtctacagaaaaaaattggccgt
ataatgcctgtgattatcgatgaggttgacgacgagggtgctatcggtcgcacccaaggc
gacgcgccggaaattgatggtgccgtctacttaaacgatgaattcgatgtcgagcctggc
gatattgtgctggtggaaattgagcacgccgatgaatacgacttgtggggttcggtggtt
gagttggcctag
DBGET
integrated database retrieval system
