Simiduia litorea: R50072_29430
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Entry
R50072_29430 CDS
T10759
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slio03016
]
R50072_29430 (truB)
Enzymes [BR:
slio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R50072_29430 (truB)
Transfer RNA biogenesis [BR:
slio03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R50072_29430 (truB)
Prokaryotic type
R50072_29430 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BFM12790
LinkDB
All DBs
Position
complement(3335824..3336771)
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AA seq
315 aa
AA seq
DB search
MARKPKGRPISGVLVLNKPGGMTSNRALQIAKRLFYVAKAGHTGSLDPLATGVLPLCFGD
STKFSQYLLDADKTYESTFRLGERTDTSDSDGDIVETHLAQHLTEAMVLKALQAFKGQIS
QVPSMFSALKKDGQPLYKLARQGIEVERKARQVTVYALELLAFRPGEVAEVDVRVSCSKG
TYIRSIAEDLGQALGVGGHVSRLHRTQAGPFTLAQSVSIDRLEALRADAEPDVLDALLLP
VDAPIADMPKLALPEATAYYFRQGNPVMDAQAFALGGEGDKVRVFDQAGEFLGIGELSDD
GRVAPKRLVATNSAD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaacctaaagggcgtcctattagcggcgtcttggtgttgaataagccgggc
ggaatgacatccaaccgtgcgctacaaattgcaaagcgactattttacgttgctaaagcg
ggtcataccggtagcctagaccctttggccaccggtgttttgcctctgtgtttcggtgat
tccaccaaattttcccagtatttgttagatgccgataaaacctacgaaagtacctttcgc
ttgggcgagcgcaccgatactagtgattcggacggggatatcgtggaaactcatctagcg
caacacctgactgaggcgatggtattaaaggctttacaggcttttaaggggcagataagc
caggtgccatcgatgttttcagcgcttaaaaaagacggtcagccgctctacaagctcgcg
cgacaaggcattgaggttgagcgcaaggcgcgtcaagtcacggtttatgcgcttgagcta
ctggccttccggcccggcgaggtggctgaagttgacgtccgcgtcagttgctcgaaaggc
acctatatcagaagcattgccgaggacttaggtcaggcactgggtgttggtggccatgtg
tcgcgtttgcatcgtacgcaggcagggccttttacgcttgcacagagtgttagcatcgat
cgtttggaggcacttcgggccgacgctgagccggatgttttagacgctttgttgctgccg
gtagatgccccaattgcggacatgccaaagctggcattaccggaagctaccgcctactat
ttccgccagggcaatcccgttatggacgcgcaggcctttgccttagggggcgaaggtgat
aaggtgcgtgtctttgatcaagctggtgaatttttaggcattggcgaattaagcgacgac
ggtagggtagcgccaaagcgcctcgttgcaacgaattcagcggactaa
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