Simiduia litorea: R50072_32740
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Entry
R50072_32740 CDS
T10759
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
slio Simiduia litorea
Pathway
slio00730
Thiamine metabolism
slio01100
Metabolic pathways
slio01240
Biosynthesis of cofactors
slio04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
R50072_32740 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
R50072_32740 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slio03016
]
R50072_32740 (thiI)
Enzymes [BR:
slio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
R50072_32740 (thiI)
Transfer RNA biogenesis [BR:
slio03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
R50072_32740 (thiI)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
ThiI_fer
Rhodanese
QueC
Motif
Other DBs
NCBI-ProteinID:
BFM13121
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Position
complement(3681998..3683482)
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AA seq
494 aa
AA seq
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MHFIVKLFPEITIKSPPVRKRFIKQLRDNLRSQLVQVDTGIKVERDWEKIEVLAPGDDAL
LSARISDVLARTPGIANFVRVQPFPLGDMHDVFEKTLSVWGPLLEGKTFCVRAKRTGSHA
FSSIDVERYVGGGLNQHSGAKGVKLKNPDVVVKIEIRDDNLYVIEEQTPGLGGFPIGSQE
GVLSLISGGFDSTVASYLMIKRGIRTHYCFFNLGGRAHELGVKEVAFFLWNKYGSSHPVK
FVTVPFEGVISEILQNVDNSYMGVVLKRMMLRAASKVAAALDIQALVTGEAVAQVSSQTL
PNLAAIDAVTDTLVLRPLIVMDKGDIIDISRAIGTEDFAASMPEYCGVISVKPTTKAKME
KVLAAEAKFDFDILEQAVNTRNTQFIQDVVADLETTVVNVDVVTEAGNSVVIDIRHPNEE
ELRPLRLANVDVQKIPFFSLNTRFSSLDASRQYLLYCDKGVMSQLHAEHLKDAGFSNVGV
YRPDRQAAGCALQS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcattttatcgttaagcttttccctgaaatcaccattaaaagcccgccagtgcgcaag
cgcttcataaaacagttgcgtgacaacttgcgctctcaattggtgcaggtagataccggc
attaaggttgagcgggattgggaaaagatcgaagtgctggcgcctggcgacgatgcgttg
ttgtccgcgcgcattagcgatgtattggcgcgcaccccaggtattgccaattttgtccgc
gtgcagccctttcctctcggcgatatgcacgacgtattcgagaaaaccctgtcggtgtgg
gggcccttgctcgaaggtaaaaccttttgtgtgcgtgccaagcgtaccggcagccacgcg
ttctcttccattgatgtagagcgctatgtcgggggtggcttgaaccagcattccggtgcc
aagggtgtgaagctaaagaatccggatgtggtggttaaaatcgaaattcgcgatgacaat
ttatatgtcattgaggagcagacgccggggcttggtggattccccatcggctcgcaagag
ggggtattgtctttgatctccggtggctttgattctaccgtcgccagctatttgatgatt
aagcgcggtattcgcacccactactgtttcttcaacttgggtggtcgagcgcacgagttg
ggggtgaaggaggtggctttctttctttggaacaaatatggctcgtcgcacccagttaaa
tttgtcaccgtgccgttcgaaggtgtgatcagtgaaattttacaaaatgtagacaactcc
tatatgggcgttgtactcaagcgcatgatgttgcgcgccgcgagcaaggtggcggcggcg
ttggatattcaggcgttagtcacgggcgaagcagtggcccaagtatcgagtcaaacctta
cccaatttggcggctattgatgccgtgaccgatacgctggtcttgcgcccgctgatcgtc
atggataagggcgatattatcgacatatctcgcgcgatcggcaccgaagactttgccgct
tccatgcctgaatactgtggcgttatctctgtaaaaccaaccaccaaagccaaaatggaa
aaggtgttggcggcagaggcgaaatttgattttgatattctcgagcaggcggtgaacacc
cgaaatactcagtttatacaggatgttgtggccgatttagagacaacggtcgtcaatgtt
gatgtggtgaccgaggcaggcaacagtgtggtcatcgatattcgccaccccaacgaagaa
gagttgcggccactgcgcttagccaatgtggacgtgcaaaaaattccatttttcagtttg
aatacccgtttctccagcctagatgcgagccgtcaatatttgctgtactgcgataaaggt
gtgatgagtcaattgcatgccgagcatctaaaagatgcaggctttagcaatgttggggtt
tatcggcccgacaggcaggccgctggctgtgcactgcagtcctaa
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