Simiduia litorea: R50072_34130
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Entry
R50072_34130 CDS
T10759
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
slio Simiduia litorea
Pathway
slio00052
Galactose metabolism
slio01100
Metabolic pathways
slio01120
Microbial metabolism in diverse environments
Module
slio_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
R50072_34130 (dgoD)
Enzymes [BR:
slio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
R50072_34130 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
SLT
DUF7552
Motif
Other DBs
NCBI-ProteinID:
BFM13260
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Position
complement(3853770..3854924)
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AA seq
384 aa
AA seq
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MKITDVIAYPVWVGHRNLCLVKVETDAGIYGWGESGLSSRELAVAGAVKHFREFLIGRDA
RHIGALWQEMYRSQYFEGGRVLTAAISAIDIALWDIAGKALGVPVHQLLGGKQRHEIPCF
VTSIKPMGAELIDDCKRLAADGWQVIRATTGEHGNPSQDTQFDVRKSIAAATGALKELRQ
ELGEAVVLGVDYHHRFTVAEAASFCNKMPAGTLDFIEEPIRDQTPSAYAALRSMTDVPFA
IGEEFASKWDFMPYIESGLNQFARIDVCNVGGLTEAMKVAAMAETHYIDVMPHDPLGPVC
TAATIQMCAAIPNLAWCEVAPYDSDRTDHNRFFINRPIETNGVYPVLDAPGLGIDVDEAA
LKEQSFKFWEAPRLRKPDGSFTNW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacagatgttatcgcctaccccgtgtgggttggccaccgcaacttgtgttta
gtgaaagttgaaaccgatgcgggtatttacggttggggcgagtcgggtttatctagccgc
gaattggcggtggcgggcgcggtaaaacattttcgcgaatttttaattggtcgcgatgcc
cgccacattggtgcgctttggcaggaaatgtatcgcagccaatattttgagggtggccga
gtgttaacggcagccatatccgcgatcgacattgcgttgtgggacattgctggcaaagcc
ttgggcgtgcctgtgcaccaattattaggcggtaagcagcgccatgaaatcccctgtttt
gttaccagcattaagccgatgggcgccgaactcattgacgattgtaagcgcctagcggcc
gatggttggcaagtgattcgtgccaccacgggcgagcatggcaacccgagtcaagacacg
caatttgatgtgcgtaaatccattgctgccgccaccggtgcgcttaaagagttgcgccaa
gagttaggtgaggctgtggtgctgggcgtcgactatcaccatcgttttacggtggccgag
gcggcgtccttttgtaataaaatgccggctggcactttggatttcatcgaagaacctatt
cgagatcagacgccttctgcttacgcggcgctgcgcagtatgactgacgtgcctttcgct
attggcgaagagttcgccagcaagtgggattttatgccttacatcgagtcgggtctgaat
cagtttgcccgtatcgatgtgtgcaatgtgggcggtttaaccgaggcgatgaaggtggcg
gccatggcagaaacgcactatatcgatgtgatgcctcacgacccactcggccccgtgtgc
acggctgccactattcagatgtgcgccgctattcccaatttggcgtggtgtgaagtggcg
ccctatgacagcgaccgcaccgaccacaaccgcttctttatcaatcgaccgatcgagact
aacggtgtttatccggttcttgatgccccggggttaggtatagatgtggatgaggctgcg
ctgaaagagcagagcttcaaattctgggaggcgcctcgtctgcgcaagccagacggctct
tttaccaactggtag
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