Simiduia litorea: R50072_34920
Help
Entry
R50072_34920 CDS
T10759
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slio Simiduia litorea
Pathway
slio00061
Fatty acid biosynthesis
slio00071
Fatty acid degradation
slio01100
Metabolic pathways
slio01212
Fatty acid metabolism
slio02024
Quorum sensing
slio04146
Peroxisome
Module
slio_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
R50072_34920
00071 Fatty acid degradation
R50072_34920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
R50072_34920
09145 Cellular community - prokaryotes
02024 Quorum sensing
R50072_34920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slio01004
]
R50072_34920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slio04147
]
R50072_34920
Enzymes [BR:
slio01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
R50072_34920
Lipid biosynthesis proteins [BR:
slio01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
R50072_34920
Exosome [BR:
slio04147
]
Exosomal proteins
Exosomal proteins of breast milk
R50072_34920
Exosomal proteins of breast cancer cells
R50072_34920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
SH3_1
Motif
Other DBs
NCBI-ProteinID:
BFM13339
LinkDB
All DBs
Position
complement(3950959..3952605)
Genome browser
AA seq
548 aa
AA seq
DB search
MEYLLPLAQFSARVAEHPNRIYLNQPVERQWTQWSWADVDTQARKIAAGLASHFQAGDKI
AILAKNSAEWFVADLAIMMAGMVSVPIYSTAGEDTIAYVLEHSEARAVFLGKLDDCAPAN
NAIPASVLRIAFPYPTADASAHWQAWLDTYEPLAQLPTQQPDDIFTLVYTSGSTGRPKGV
VLTCRNVASSSYTSAAQMTWLAGDRCMSYLPLAHITERCVLELMSIYSGVEIFFVESLET
FVDDVKYARPTFFISVPRLWTKFQAGILAKMPDQKLQRLLRIPLLGKLVAKKVRAGLGLD
NCRVFGSGSAPIAPDMLRWYARLGMPIAEGWGMTETAGMSCSNLPYSEKRIGTIGVPVDC
VEMRLGENDEVQIRGEAVFTQYYNNPEATAESFVDGWFKTGDRGTQTTDGAYKIVGRLKE
QFKTAKGKYVAPAPIENLIARNHWVEQSCVMGIGRPAPVALVVLTEAGRAAARSELEHSL
AQSLAAFNAELESHEKLAGFMVMQEPWTIENGLLTPTLKIRRGVIEERFVHLLDKMTERA
VQFEESLL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaatatctcttaccgctagcgcaattcagtgcccgcgtagccgagcaccccaataga
atttatttaaatcagccagttgagcgccaatggacgcagtggagctgggcggatgtcgac
acgcaggcgcgcaaaattgccgctggactggcgagtcattttcaggccggcgataaaatt
gccatactcgccaaaaattctgccgagtggtttgtggctgacctcgccatcatgatggcg
ggcatggtgagcgtgcctatttattcgaccgcgggcgaagacacgattgcctatgtgtta
gagcacagcgaggcgcgtgcggttttcctaggtaagttagatgattgtgcaccggctaat
aacgctattcctgcatcggttttgcgcattgcctttccctacccaacagccgatgcttcc
gcgcactggcaagcgtggcttgatacctatgagccgctcgcccaattgcccacccagcaa
cccgatgacatcttcaccttggtttatacctccggttctaccggccgccccaaaggcgta
gtgttaacgtgccgcaatgtggcttcgtccagctatacctcagcggcgcaaatgacctgg
ctagcaggcgaccgctgtatgtcttacttgccgctggcgcatattaccgagcgctgtgtg
ctcgagttgatgtccatttattcgggagtagaaatttttttcgtcgagtcgctggaaacc
tttgtcgacgatgtgaagtatgcgcggcccacattctttatttctgtgccacgcctgtgg
accaaattccaagccggtatattagcgaaaatgccggatcaaaagttacagcgcttattg
cgcattcctttgcttggcaaattggtggcaaagaaagttcgcgccggtttaggtttagat
aactgccgcgtatttggctcgggctctgcgcccatcgcgccggatatgttgcgctggtac
gcgcgcttaggtatgcctattgccgagggctggggtatgacggaaacggcgggtatgtct
tgctccaatttgccttatagcgaaaaacgcattggcaccatcggtgtgccggtggattgt
gtagaaatgcgcttaggcgaaaacgacgaggtgcaaattcgcggcgaggcggtgtttact
cagtattacaataatcctgaagccactgccgagtccttcgtcgatggttggtttaaaact
ggcgatcgcggtacccaaacaaccgatggtgcctacaaaattgtcggccgcttgaaagag
cagtttaaaacggcaaaaggaaaatatgtggcgcctgcgcctattgaaaatctcattgct
cgcaatcattgggtggagcaatcttgcgttatgggtattggtcgccccgcgcctgtggcg
ctggtcgttttaaccgaggcgggacgcgccgcggcaagatcagagttggagcactcgctc
gcgcagtccttggcggcatttaatgccgagttggaatctcatgaaaagctggccggtttt
atggtcatgcaagagccttggaccattgaaaacggcctgttaacgccgacgctcaaaatt
aggcgcggtgttattgaagagcgctttgttcatctgctcgacaaaatgacagagcgagct
gtgcagtttgaagaatcgcttttatag
DBGET
integrated database retrieval system
