Simiduia litorea: R50072_38730
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Entry
R50072_38730 CDS
T10759
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slio Simiduia litorea
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slio02000
]
R50072_38730
Transporters [BR:
slio02000
]
Other transporters
Pores ion channels [TC:
1
]
R50072_38730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
TSP_3
Phage_OMP
Opacity
Motif
Other DBs
NCBI-ProteinID:
BFM13720
LinkDB
All DBs
Position
complement(4333240..4334358)
Genome browser
AA seq
372 aa
AA seq
DB search
MKNVLMMLPLALAIGATTQAQADQSGLELTAGWNHTNWDKDRGIKDSTGWLGGLGYRIND
SWGIEGFYIENDSSVQSTLDTLETRQLHFDALYHFNTDTNVQPFFLFGAGKNDYKLLGAK
DDESTFNLGAGIKFFLTDNFILRGDMRGIRGSENGDIDLGTNVALSYFFGDRGGKSAPVV
AAVAAPSDADNDGVIDTKDACPQTPAGVKVDARGCALDSDKDGVADHKDQCPNTEAGLKV
DEVGCAISLTEAVAIKLNVTFDNNAAVVKPAFFSEIGAVATFMKSYKDSVVEVQGYTDSR
GSEAYNQTLSQKRANAVRDVLVQEYGVAAERVTAKGYGEANPIADNETAEGREANRRVVA
SVQSQKTTKVKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtattaatgatgttgccactagcactagccattggcgctaccacccaggct
caagctgatcaatcgggcttagagctgactgctggttggaatcacaccaattgggacaaa
gatcgcggaataaaagattctactggttggttgggtggtttgggttaccgcatcaatgat
agctggggaatcgaaggtttctacatagaaaacgacagctcggttcaatctacattagat
acgttggaaacgaggcagctgcatttcgatgcgctttatcatttcaataccgataccaat
gttcagccattctttctctttggtgccggcaaaaacgactacaaactgctgggcgctaag
gatgatgaaagcacctttaacttgggcgcgggcattaaatttttcttgactgataatttc
attttacgcggtgatatgcgcggcattcgaggttctgaaaatggcgatatcgacctaggt
accaatgttgcactatcttacttttttggcgatcgtggcggcaagtcagcgcctgtggtt
gccgctgtagctgcgcctagcgatgctgataatgatggcgtaattgataccaaagatgcc
tgcccacaaacacccgctggcgttaaggtagacgctagaggttgtgcattagattcagat
aaagatggcgtagccgatcataaagaccagtgcccaaataccgaagctggtttaaaagtt
gatgaggtgggatgtgctatttcattaacagaagcggtagccattaaactgaatgtaacc
tttgataataatgctgccgttgttaagccagcattttttagcgagattggtgccgttgct
actttcatgaaaagctacaaagattctgtggttgaagtacaaggctacaccgattcacgt
ggatctgaagcctacaatcaaaccctatcgcagaagcgtgcaaatgctgttcgcgatgta
ttggttcaagagtatggcgtagctgctgagcgcgtaacggcaaaaggttacggtgaggcc
aacccgattgcggataatgaaactgcggaaggccgcgaagcgaatcgtcgtgttgtggct
tcagtacaatcccaaaaaaccacgaaagtaaaaaagtaa
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