Simiduia litorea: R50072_38870
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Entry
R50072_38870 CDS
T10759
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
slio Simiduia litorea
Pathway
slio00540
Lipopolysaccharide biosynthesis
slio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
R50072_38870
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slio01005
]
R50072_38870
Enzymes [BR:
slio01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
R50072_38870
Lipopolysaccharide biosynthesis proteins [BR:
slio01005
]
Core region
R50072_38870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
PufQ
Motif
Other DBs
NCBI-ProteinID:
BFM13734
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All DBs
Position
complement(4343526..4344839)
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AA seq
437 aa
AA seq
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MYMDINIRLLVKDHFLNQMWLVGWLLVALVGYTVLSIFSDNLAKPFIDLILLAALVAFFF
APKPVTSSPAIYIFVFALAAALLTWALMLLQHADIAESSPQVHKLTYWFFLIPIAFACGG
DRRKVIGIWLIAGVALVFTPWVKGIGVTAIVNGITGSRTDLNLLNAQHAAMYFAVLALGA
VAVLPRLLALKNLRWLAVGACLLVLVYALVAVIITQTRAVWLGLSIALIVQMAVSLRVTS
ASWRRVTRLVAMVVIPLIIVLATNWQLIQQRVIAESDSIAALWADDAIAFDSAGIRLHFW
RESLHWIAERPLVGWGVEGKKMVIQQADSFPEAIKKQDLSHLHNSFLDALVNFGLLGLAA
IVALWAYLVRACVQLWRNGHISNDLLVFYLSFLALWFVINCFESYMQFASGRFVFALISG
GMLSLVWRTRLLPGKSA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatggacattaatattcgcttgttggtgaaggatcactttctcaatcaaatgtgg
cttgttggttggttgctggtagcattggttggctatacggtgttatcgattttctcggat
aacttggcaaagccatttatcgacttgatattgttagccgcgttggtcgcatttttcttt
gccccaaagccagtaacatctagcccggcaatctatatttttgtatttgccttagcggcg
gcattgcttacttgggcattgatgttgctacagcatgcagatattgctgaaagctctccg
caagttcataagctgacctattggttctttctcatccccattgccttcgcatgcggtggc
gatcggcgcaaggttatcggcatttggttgattgcgggtgttgccttggtgttcacgccg
tgggtgaaagggattggagtcactgcgattgtaaatgggatcacgggctcgcgaacggat
ttaaacctgcttaacgcccaacatgcggccatgtattttgctgtattggcgcttggcgcg
gttgcggtgttaccgcgtctgctagcgcttaagaacctgcgttggctcgcggttggggct
tgcttgcttgtgcttgtttacgccttggtggcagttattattacgcagacgcgcgctgtc
tggctcggtttatccatcgcactaatagttcagatggctgtatcgctacgggttactagc
gccagttggcggcgggtgacgaggttagtggccatggtagtcattcctttaatcatcgta
ttggctacgaattggcagctgatacagcagcgcgttatagcagagagcgattctattgcc
gccctatgggctgatgatgcaatcgctttcgacagtgccggtattcgactgcatttttgg
cgtgagtcattgcattggatagccgagcggccgttagtgggctggggagtggagggtaaa
aaaatggtgattcagcaggctgactccttccctgaggcgataaagaagcaggatttatcg
cacctacataactcgtttttggatgccttggttaattttggtctattgggcttggctgca
atagtcgcgctttgggcttatctggttcgggcgtgtgtgcaactctggcgtaatggacat
atttctaacgatttgttggtgttctatctgtcctttttagcgttatggtttgtaataaac
tgttttgagtcttatatgcaattcgccagtggtcggtttgtgttcgcattgattagcggc
ggtatgctgagtttggtgtggcgcaccagactattaccgggtaagtcggcgtaa
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