Shewanella litorisediminis: JQC75_01190
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Entry
JQC75_01190 CDS
T07182
Name
(GenBank) heme lyase CcmF/NrfE family subunit
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_01190
Transporters [BR:
slit02000
]
Other transporters
Others
JQC75_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
DUF2651
Motif
Other DBs
NCBI-ProteinID:
QRH02083
LinkDB
All DBs
Position
241964..243940
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AA seq
658 aa
AA seq
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MIPELGHFALITGLAFAILLSCVPLIGVARKDQYLVRYAWPLAYGMFLFIALSVVTLAYS
FAVDDFSVAYVAHHSNSQLPSFFKIAAVWGGHEGSLLFWVFSLSVWAAAVAKFSKGLEEV
FTARVLAVLGMITVGFTLFMLLTSSPFERLFPTPMEGRDLNPMLQDVGLIFHPPMLYLGY
VGFSVSFAFAIAALLSGRLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLIGTALVHSLIVTEKRGTFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS
VHSFAADPSRGMFILLLLGLAIGGSLTLFAFRASDMNSPAKFELWSKETMLLVCNLMLTV
ACGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIILVMFVFMGIGPIIRWKKAKEGE
VKRQLMIPAIISAVVGIAVPFVVGGAFNAWVALGIAAAVWITLASLRAGYNIIKTNEGLS
LARMGRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGISHELAGYTFKFTETKNV
VGPNYTAQQGQIEVYKGDKFLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPIS
ATEYAVRLNYKPFVRWLWFGGIFMMVGGFFAASDKRYRVKTTVSDKEKEAAKGNLATA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggaacttggacactttgcgctgataacaggactggcatttgccatactgctc
agctgcgtgccgctcattggagtcgcgcgcaaagatcagtatctcgtgcgctacgcctgg
ccattggcctacggtatgtttctgttcattgcactgtctgttgtgacgctggcgtacagc
ttcgcagtcgatgatttctcagtcgcttacgtggcacaccattccaactcacagttgccc
agcttcttcaagatagctgccgtttggggtggtcacgaaggctccctgctgttttgggtg
ttttccctttcagtatgggccgctgcagtagccaaattcagtaagggattggaagaggtc
tttaccgcccgggtactggcggtgctcggtatgattaccgtgggctttactctgttcatg
ctgctgacctcgagcccgttcgagcgcctgttcccgacaccaatggaaggtcgtgacctt
aaccccatgctgcaggacgtaggtcttatcttccacccacctatgctgtacctgggttat
gtgggcttctcggtcagctttgcgtttgcgattgcagcgttgctcagtggtcgtctcgac
tcagcctgggcccgctggagccgtccgtggacgctggcggcgtggattttcctgaccggt
ggtatcgcgctgggttcctggtgggcttactatgagcttggctggggtggctggtggttc
tgggatccggtagagaacgcctcctttatgccatggctgattggtacagctctggtgcat
tcgctgattgtaaccgagaagcgcggcaccttccgtaactggacggtactgttgtctatc
tttgctttctccctgagtttgctcggtactttcatcgtacgttccggcgtactgacctcg
gtgcactcctttgctgccgacccaagccgcggcatgtttatcttgctgctcctcggtctt
gccattggtggttcgcttaccctgtttgcattccgtgccagcgatatgaacagcccggca
aagtttgagctgtggtcaaaagaaaccatgctgctggtatgtaacctcatgctgaccgtg
gcctgcggtacagtgttgctgggcaccctgtacccgctgctgattgatgcgctgggtatg
ggtaagatttctgttggcccaccatacttcaacgccgtgttcgttcccatcattcttgtc
atgttcgtcttcatgggtattggccccatcatccgttggaagaaggccaaagaaggtgaa
gtaaaacgtcagctgatgatcccggctatcatatctgccgtggtgggcattgctgtgcct
ttcgttgtcggcggtgcttttaacgcctgggttgcgttgggtattgccgctgctgtgtgg
attaccctggcgtcgctgcgtgccggttataacatcatcaagactaacgaaggtctgagt
cttgctcgtatggggcgcagtcagttgggcatgataatcgcgcacctgggtatcgcggtc
tcggtagtgggtggcaccatggtgtccaactactccatcgagaagagcgtacgtatggga
ccgggtatcagccatgagcttgccggttataccttcaagtttaccgagaccaaaaacgta
gttggccccaactacacagcacagcaaggtcagattgaggtgtataaaggtgataagttc
ctgacactgctcaaaccagaccgccgtcagtacaatgtgcgcaccatggacatgaccgag
gccggtatcgactggggtctgttccgcgacttgtatgtcaccatgggtgatcctatcagc
gcgactgaatacgctgtgcgtctgaactataagccgtttgtgcgttggttatggttcggc
ggtattttcatgatggtgggtggcttcttcgcggcctcggataagcgttatcgtgttaag
acaacggtatccgataaagagaaagaagcggccaaaggtaacctggctacagcctga
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