Shewanella litorisediminis: JQC75_01950
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Entry
JQC75_01950 CDS
T07182
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_01950
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st_1
MS_channel_3rd
MS_channel_1st
ATP-synt_I
NEDD4_Bsd2
DUF3854
DUF6057
Motif
Other DBs
NCBI-ProteinID:
QRH02212
UniProt:
A0ABX7G4M6
LinkDB
All DBs
Position
complement(433892..434740)
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AA seq
282 aa
AA seq
DB search
MNNTGLEQGLQQELAQLQNVYDLITEFLVQYSFQLVGALIIFLLGLWLAARVAGMVNKQL
EKYRVDITLASFVTHLVRILIIIMVAIVALGKLGISVTPMVAAIGAASLGAGLAIQGMLS
NYAAGITIIVTRPFAVGNTISVRGVTGVVKDIMLGMTILTNEEGEQISIPNKHIVGEILH
NSFEYKLVESQFNICYDQDAEAVIALVNNALLASGKLHAEQPPQVGINGFNNLGIEIGLR
YWLPTQSYFQDKYITHQAIHGALKAAAIRIPSLSREAHLIGE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaataacacaggtctggagcagggactgcaacaggaattggcccagctgcaaaacgtc
tatgacctcatcaccgagtttttggtgcagtacagttttcagttggttggcgccctgatt
atttttctgctcggcctctggcttgcagccagggtcgccggcatggtcaacaagcagttg
gaaaagtatcgggtcgacatcaccctcgccagctttgtgacccatctggtacgcattctg
attatcatcatggtggccatagtcgccctgggtaagctggggattagcgtcacccccatg
gtggcagccataggcgccgcctcgctgggagccggtctggccattcaggggatgctgtca
aactatgccgccgggatcaccatcattgtgacccgcccttttgccgtgggtaacaccatc
agcgtgcgcggtgtgaccggggtggtgaaagacatcatgcttggcatgacaattctcacc
aatgaggaaggcgagcagatcagcattcccaacaagcacatcgtgggagaaatcctgcat
aactcctttgaatacaagctggtagaaagccaattcaacatctgctatgaccaggatgcc
gaggccgttatcgccttggtcaataatgcattactcgccagcggaaagcttcatgccgag
cagcctccccaagtggggattaacgggtttaacaatctggggattgaaattggcctcaga
tactggctgcctacccagagctactttcaggacaaatacatcacccatcaggcgattcac
ggggcgctgaaagccgctgctatcaggatcccatcccttagccgggaagcgcaccttatc
ggtgaataa
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