Shewanella litorisediminis: JQC75_02890
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Entry
JQC75_02890 CDS
T07182
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
slit
Shewanella litorisediminis
Pathway
slit02020
Two-component system
slit02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JQC75_02890
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JQC75_02890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slit02035
]
JQC75_02890
Bacterial motility proteins [BR:
slit02035
]
Flagellar system
Chemotaxis proteins
MCPs
JQC75_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
KASH_CCD
BLOC1_2
DASH_Duo1
Motif
Other DBs
NCBI-ProteinID:
QRH02389
UniProt:
A0ABX7G513
LinkDB
All DBs
Position
655298..656917
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AA seq
539 aa
AA seq
DB search
MTWFNNLPIFKKVGVIFIISVIIFAVNLAISLVSINKNRETLGFMEEKIYQRVELANQNL
MLVQRLEEVYTQAVSFADEDLLEQAGGLHENLAANLTLLQSSDTKETDTLRQMQSQLANY
NQITSGLAKSMLDGSADMANIGAISQKKSAVYEALLGHVQQYKQAKVLEFKNSIKEAADR
SQNSLWLTMVVGVVLLLFMAIVTMSIARAISASAKGVAHSLGELANGKGDLRHQLPASSR
DELGQVSGNFNRFLGLLADSIQRVVNVTAPLLNNAHDLKDKMETATGATQRQSHDAQTVQ
ASMEEMRLSVIDISHNASQAADAAQIAEREATDGMAVVQRTMDISLELNREIEHAATAIN
ELARDTESVSSILNVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTAD
ATKEIREVLSRLKGAAESSVSTMTVAMSKSSENEEHAQKTGMALKTIQEQIVSINAMNTH
IARSTDEQSQVASRVVDNVVDMNASFEQTLNILDQVHQVSSELSEFAEELQSATSQFKL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacatggtttaataaccttcccatctttaaaaaagtcggtgtcatcttcatcatttct
gtgatcatctttgcggtgaatctcgccattagcctggtctctatcaataaaaatcgtgaa
accctgggatttatggaagagaagatttaccagcgggttgagctggcgaaccaaaatctg
atgttggtgcagcggctcgaggaggtatacacccaggcggtgtcatttgccgatgaagac
ctgttggagcaagcaggcggcctgcatgaaaacctggcggccaaccttacgctgttgcag
agctcagacacaaaagagaccgacacgcttcgacagatgcagtcgcagcttgccaattac
aaccagataacctctggcttggcaaagagcatgttggatggttctgcagatatggccaac
ataggtgccatcagtcagaaaaagtccgctgtgtatgaagccctgctgggtcatgtgcag
caatacaagcaggctaaggtactggaattcaaaaactccatcaaagaagctgcagacaga
tcgcaaaacagtctctggttgaccatggtggtgggggtggtgctgctgttgtttatggcc
atagtgactatgtctattgctcgggccatcagtgccagtgccaaaggtgtggcccattct
cttggtgagttggccaatggcaagggggatttgcgccaccagttgcccgccagtagtcgc
gatgagctggggcaggtgtccggtaacttcaatcgcttcctagggctcttggcggactcc
atccaaagggtggtgaatgtgacggcaccgctgctcaacaacgcccatgatttgaaagac
aagatggagacggcaacaggggctacccagcgtcagagccacgatgctcaaactgtgcag
gcgtctatggaagagatgcgattgtcggtaattgatatctcccataatgccagccaggcc
gcagatgccgcgcaaatagccgagcgggaggccactgacgggatggccgtggtacagcgc
accatggacatttcccttgagctgaatcgcgaaattgagcatgcggcgaccgctatcaat
gagttggcaagggataccgaaagcgtcagttcgattctgaatgttatcacctccatcgct
gagcaaactaacctattggcactgaatgctgccattgaggcggccagggctggagagcag
gggcgcggttttgcggtggtcgcagatgaagtacgcgcgctggcatctaaaactgccgat
gccaccaaggaaattcgtgaggtactgtcgcggctaaagggcgctgccgaatcgtcggta
agcaccatgactgtggctatgtccaagtcgagtgaaaacgaggagcatgcacaaaagacg
ggaatggcactcaagaccattcaggagcaaattgtcagtatcaatgcaatgaacacccac
attgccaggtcaaccgatgagcagtctcaggtggcctccagggtggtggataatgtggtt
gatatgaatgcgtccttcgaacaaaccctgaatattctggatcaagtgcatcaggtttcg
tctgagctatctgagtttgccgaagagctacaaagcgcgacgtcccaattcaagctttaa
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