KEGG   Shewanella litorisediminis: JQC75_03390
Entry
JQC75_03390       CDS       T07182                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
slit  Shewanella litorisediminis
Pathway
slit03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:slit00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JQC75_03390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slit02044]
    JQC75_03390
Secretion system [BR:slit02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JQC75_03390
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: QRH02484
LinkDB
Position
complement(772062..772532)
AA seq 156 aa
MGSAQGAAYLKLGDIKGESQDEGHLEEIELLAWSWGTSNSMNGSGSLCVMDVSLAKYTDS
ATVDILMGQMMGTQYPDAEISMTLSGTEQAEDYFTLRMRNVSVSSYQTGGSGDQRMSESV
SLHFDEATIEYRRPGPDGKPGAPELTRISSSSHKCH
NT seq 471 nt   +upstreamnt  +downstreamnt
atgggatcagctcaaggggcagcctatttaaaactgggtgatatcaaaggcgaaagccag
gacgaaggtcacttggaggaaatcgagctgctcgcatggagttggggcacgagcaacagc
atgaatggctcaggcagcctttgtgttatggatgtgtctctggccaaatataccgacagc
gccaccgtggatattttaatggggcaaatgatgggcacccagtaccctgatgccgaaatt
tccatgacgctcagcggcaccgaacaggctgaggactactttacactgcgcatgcgcaat
gtcagtgtgtccagttatcaaacaggcggcagtggcgatcaacggatgtcggaaagcgtg
agtctgcacttcgatgaagccaccatagagtatcgtcgccccggcccggatggcaaaccc
ggcgcccccgagctaacccgtatcagctcaagcagccacaagtgccactga

DBGET integrated database retrieval system