KEGG   Shewanella litorisediminis: JQC75_04120
Entry
JQC75_04120       CDS       T07182                                 
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
  KO
K03717  LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
slit  Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:slit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:slit03000]
    JQC75_04120 (nhaR)
Transcription factors [BR:slit03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    JQC75_04120 (nhaR)
SSDB
Motif
Pfam: HTH_1 LysR_substrate HTH_30 MarR
Other DBs
NCBI-ProteinID: QRH02617
LinkDB
Position
935319..936227
AA seq 302 aa
MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP
TDLGELVFRYADKMFNLSYELLDILNYRKDAAMLFEVGIADALSKALSSRVLLSVLPTDG
SMRLACYEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSSKTYSK
SFPACLEQDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGYFGQGIFVA
PSIYKQDILGHGMQVLGETLDVREEYHVMFAERMIQHPAVKRLLETRFDDLFSGLDSQVQ
SF
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcagcatctgaactacaaccatctttattatttctggatggtccagagcaagggctcg
gtggtaaaagccgccgaggccctgtgcctcacgccgcaaacagtgaccgggcaaatccgc
gcactggaagacaggctcggtggcgcgctgtttaaacgggtgggtcgacagctggagccc
acagatctgggtgaattggtctttcggtacgctgacaagatgttcaacttaagctatgag
cttttggatattttgaactatcgaaaagacgcggcgatgttgtttgaggttggcattgcc
gatgccttgtccaaggcgttgtcgagccgggtgctgctgtccgtgttacccactgatggc
agcatgcgtctggcctgctatgaggcaactcacgaaagcctgatgacccgattacgggag
cacaaactggatatgatcctgtcagattgtgccggtgagtcgcttaaatacccggagatc
ttatccaagaaattgggtgaatgcggtgtcagttttttttcttccaaaacctacagcaaa
tctttcccggcctgccttgagcaagacaagctgctgatcccgggtaagcgaaccagtctt
gggcagcagcttcatcgctggtttgccgaaaagaatctcgaagtgcgtattcttggggag
ttcgacgacgctgccatgatgaaagccttcggttatttcgggcaaggcatttttgtggcg
ccatcgatttacaagcaggacatattgggacatggcatgcaggtgctgggggaaaccctg
gacgtacgcgaggaatatcatgtgatgttcgccgagcgcatgatccagcatcccgcagtg
aaaaggctgcttgagacacgttttgatgacttgttttcagggctcgacagccaggtacag
agcttttaa

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