Shewanella litorisediminis: JQC75_04345
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Entry
JQC75_04345 CDS
T07182
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_04345
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_04345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
OprF
TSP_3
Opacity
Motif
Other DBs
NCBI-ProteinID:
QRH02661
UniProt:
A0ABX7G5R6
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All DBs
Position
complement(978856..979959)
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AA seq
367 aa
AA seq
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MMKNSLKIALLASALPFGVMASDEGMSPWYVGGGVGINNYEPACDQKTMRSCGEDSPYAW
DVFAGYLFNDYFGVELGYRDLGRAEWTDYSNNLNDVGAKGTTLGLVAFWPFASKWSLSAE
AGAMNYLVYNNKRWGSNYYSDSGIAPFVGAGIGYNFTDNLKLSAKYRRYENLDEEIWNTL
EMESNYWGLELSYRFGSKAAPVLAPVVVAAVDSDNDGVNDDLDKCPATPADHKVDAYGCT
VYKDDVTTHNLGSLRFANNSSVIHKASYGSVEKLANYMNQHPGSTVEIGGHASNVGNPDY
NMTLSEKRAHAAAKLLVEKYGISAERVTAKGYGITRPVMDGNTAEAHAANRRVEAVVTGT
EKVPVLK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaactcattgaaaattgcactgctcgcatcggcgctgccatttggcgttatg
gcgtctgatgagggcatgagcccttggtatgtgggtggcggtgttggtatcaacaactat
gagccagcctgcgatcaaaaaaccatgcgttcctgtggtgaagacagtccttatgcttgg
gacgtatttgccggctatctgttcaacgactacttcggtgtcgagctgggttaccgtgac
ctgggccgagccgagtggaccgactactccaataacctgaatgacgtaggcgccaagggc
accaccctgggtctggttgctttctggccattcgcgagcaaatggagtctttctgctgaa
gccggtgctatgaactatctggtttataacaacaaacgttggggctccaactattatagt
gacagcggtattgcgccatttgtgggtgccggtatcggttacaacttcaccgacaacctg
aagctgtctgccaaatatcgtcgctacgaaaatctcgatgaagagatttggaataccctc
gagatggaaagcaactactggggtcttgagctaagctatcgtttcggcagtaaggccgct
ccggtattagctccagtcgtagtagccgctgttgattcagataatgacggtgtaaacgat
gatctggacaagtgcccagccactccagcggatcacaaggttgatgcctacggttgtacc
gtttacaaagacgatgtgaccacccataacctgggttcactgcgctttgccaacaactct
tctgttatccataaagcttcctatgggtctgttgagaaactggcaaactacatgaaccag
cacccaggttctaccgttgaaatcggtggtcatgcttccaacgtgggtaaccctgactac
aacatgacgctgtctgaaaagcgcgcccatgccgctgccaaactgctggttgaaaagtac
ggcatcagcgctgagcgcgtgactgccaagggttatggtattacccgtccggtaatggat
ggcaacaccgctgaagctcacgctgccaaccgccgtgtagaagccgttgtgaccggtact
gaaaaggtaccagtactcaagtaa
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