Shewanella litorisediminis: JQC75_04425
Help
Entry
JQC75_04425 CDS
T07182
Name
(GenBank) type IV pilin biogenesis protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
slit02044
]
JQC75_04425
02035 Bacterial motility proteins [BR:
slit02035
]
JQC75_04425
Secretion system [BR:
slit02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JQC75_04425
Bacterial motility proteins [BR:
slit02035
]
Pilus system
Pilus assembly proteins
JQC75_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QRH02675
LinkDB
All DBs
Position
997283..1000891
Genome browser
AA seq
1202 aa
AA seq
DB search
MKFNQILFAGLVTASVLPAQSFADDTDLYLNPAANNVRPQVLIIFDNSGSMDTIEDGVPG
GYDPDYKQVDGTPGYPAVGSSNSYQGRMIYFTVGTGMDESSLPIPDSPSESRRFNDFLNG
CKAARDALNQYGRFTGYIREFITSGKGKGTWQPIKENSGAERNNPIDCWEDIELGYDSNN
KDGSAYDTGYPLGYPQDKDVNSPWNNASDAQKTAKELGWNNGELVTLYTDNYLRWYTLYK
NDLLPIPPDGEGFTRLEIAKSAISGVISSIPSVDFGLAVYNLNFPDEGDSDGGRIVAGIR
ERTAAEKDAMLNTISNLPAQTNTPLCETLFEAYQYFSGGPITFGHADADYNGKDIKYSSN
SPMYDTSIENGDSYISPLSECNKVAHIIYITDGAPVLDESANDFIEKLGGKPFEYKSASG
DQAAKVSYLPALAEYMFSNDLLPNVENKQRVVTHTIGFSLGEDSEAEPLLVETASRSYLM
TSEGKKVFGTYRSADDVAGLQEAISNIIDSIPQTGQRFSAPGVAFSNADPTRTLDSAYYA
LFRPQQSPKWAGNLKKLKVNSSGTLVDSTGKPAIDSSGGIAESSCSLWSNCTGGNDGNDV
VLGGAARTIDPDSRTILSDIGSGGVFSELTRSNASIYAGGDEALATFLGLPKLDVDSELV
ATFEWIKGKNVDRDSEGALTSEDFAGVRGDIMGDPLHSQPLAIDYGGDGSNVRIFVGTNH
GALHAFRDSGSSVSESWAFMPYQLLPNLATIRRDSYLAGHSVYGIDGSPVAHIERNASGL
ITKAWLFVGMRRGGQTYYAINITNPDNPVLMWQVSNSSTGFNELGQTWSTPVITKIPGSE
KPVVIFGGGYNQGYDSGNGSNSVGRLVYLVDAETGNLIHSFGANGNTSLTGIEDSIVGSI
ATLDSNSDGYTDRLYAADLGGNVWRMDLPSADKSSWSGFKFAELGGSLPSTDRRFFYEPS
VAQTYFTNTTEVTVTDESGTTTTVAYQNVPYDAVTLGSGNRADPLSLNAEDMFFVLQDRY
VVSQQFGDGATAIPSPITFGNLYDVSSAAPSTEAENITFGTKLGWYYNFAVTGEKSLSPS
VIIKGKVYFTSFIPTQPAAGQNVCSVSSVGRLYTLDLHKGARYTEGYIIDVCDNCIPQPP
KIITPPACDSSDECTPEDLLNPPPPVLIIGKGKCDENGENCTGTVDLESGLTTNKIYYHI
DE
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaatcaaattctatttgctggcctggttacagcgtcggttttgccagcgcaa
tcttttgcggatgacacggatctctatctcaatcccgcagcaaacaatgtgcgtccccag
gtgcttattatttttgataactctgggagtatggataccatagaagacggtgttcctggt
ggatacgaccctgattataaacaagtggatggaactcctggataccctgcagtaggaagc
tccaattcctatcagggaagaatgatttattttaccgtcggaaccggaatggatgagtcg
tcgttgccgattccggacagcccatcagaatcaaggcgctttaatgattttctgaatggc
tgcaaagcggctagagatgcgctgaatcagtatggccgtttcacggggtacatcagagag
tttataacaagtggtaagggtaagggtacttggcagcctattaaggaaaacagcggcgca
gaaagaaataatcccatagattgttgggaggatattgagttaggttacgacagcaacaat
aaagatggaagtgcctatgatacaggttatcctctgggttacccgcaagataaggatgtg
aactctccatggaataacgcttccgatgctcagaaaacagcaaaagaattagggtggaat
aatggcgagttggtgacgctctatacagataattacttgcgctggtataccctctataaa
aatgatttgttgccaataccgcctgatggagaaggatttacgcgtttagaaattgcgaaa
tctgcgatatctggtgtgattagctctattccctccgtagatttcggtttagctgtttat
aaccttaacttccccgatgagggagatagtgatggtggtcgtattgtcgctggtattcga
gagagaaccgctgctgagaaagacgcaatgcttaacaccatcagtaatttacctgcacaa
accaatacgccgctttgtgaaaccttatttgaagcatatcaatacttttctggtggtcca
attacctttggacatgccgacgctgactacaatggaaaagatataaaatattcttcaaat
agtccgatgtacgacacgagtatagaaaatggcgatagctatatttcccccttatcagag
tgtaataaagtcgctcacattatttacattacagatggcgcgccggttttagatgaaagt
gcaaatgattttattgagaagttgggcggaaaaccgtttgagtataaatctgcaagtgga
gatcaggctgccaaagtaagttatttacctgcattggctgaatatatgttttccaatgat
ttattgccaaacgtagaaaacaaacagcgtgttgtgactcacaccattggatttagtttg
ggtgaagactctgaagctgaacctttattggtggaaacggcctctcgctcttatttaatg
acttctgaaggtaagaaagtttttgggacctatagaagtgccgatgatgttgcaggactt
caagaagcgattagtaatattatcgattccattccccagactggccagcgattttctgca
cctggtgttgccttcagtaatgctgaccccaccagaactctggattcagcttactatgcg
ctcttccgccctcagcaaagtccgaagtgggccggtaatttgaaaaaactgaaagttaat
tcatctggaaccttggttgattctacaggtaaaccggcaattgacagctctggtggtatt
gcagaaagctcttgcagtttgtggagtaactgtacgggtggtaatgatgggaatgacgtc
gtcttgggtggtgctgctaggacgatagatccggatagcagaacaattttaagtgatatc
ggttccggcggagtattcagtgagctaacacgctcaaatgcttctatttatgcgggtggg
gatgaggctctagcgacctttctcggattacctaaactagacgttgattccgagttggtt
gcaacattcgagtggatcaagggtaaaaatgttgatagagattctgaaggagcattgacc
tctgaagatttcgccggtgtaagaggcgatatcatgggtgatccgcttcactcccaacct
ttggctatcgattacggtggagatggttcgaatgttcgcatttttgtcggtacaaaccac
ggagcattgcacgcttttagagactctggctcttcagtcagcgagagctgggcttttatg
ccttatcagcttcttcctaacctggcaaccatacgtcgtgacagctatttggctggccat
agtgtttatggcattgatggttcacctgtagctcatattgagcgtaatgcttctggcctg
ataacgaaagcctggttgtttgtcggaatgcgtcggggagggcaaacgtattatgcgatt
aatattaccaaccctgacaatccagtgttgatgtggcaggtatccaacagctcaacaggc
tttaatgagttggggcagacttggtcgacccctgtgattaccaaaatacctggctcagaa
aaacccgtggtgatttttggtggtgggtataatcagggttatgattccggtaacggatct
aattctgttggtcgtttagtttaccttgtcgatgcagaaacaggtaacttgatccatagc
tttggtgccaatggtaatacctcacttacaggcattgaagactctatcgtaggctctata
gctaccttggatagtaatagtgatggttacacagatcggctctatgcagctgatttgggc
ggcaacgtgtggcgaatggatttgccttctgcggataagagctcctggagtggatttaag
tttgcagagttaggaggaagcctgccctcgaccgatcgcaggttcttctacgagccaagc
gtagcgcaaacgtatttcaccaataccaccgaagtaactgtgactgacgagtcaggcact
acaactacggtagcgtatcaaaatgttccttatgatgcggttacattgggatcaggaaat
cgtgcggatcctttgagtttaaacgctgaggatatgttttttgtattgcaggatagatac
gtagtgtctcaacagtttggtgatggtgctactgcgatcccatctccaataacctttggc
aatctttatgacgttagttcagctgcaccctcaacggaggctgaaaacattacatttggg
acaaagctaggctggtattataatttcgcggttactggtgaaaaaagcttatctccgtct
gtgattataaaaggaaaagtatactttacttcctttatcccgacccaaccagcggcaggt
cagaatgtgtgcagtgtgtcttcagttggacgtctttatacgctggatttacataaagga
gcacgttatacagagggctatattatagacgtatgcgataactgtattccgcagcctccc
aaaatcattactccacctgcatgtgactccagtgacgaatgtactcctgaagatctacta
aatccaccaccacctgtgctgattataggcaaaggtaaatgtgatgaaaatggtgagaat
tgtacaggaacagtggatctagagtcagggctgacaactaataagatttattaccacatt
gatgagtag
DBGET
integrated database retrieval system
