Shewanella litorisediminis: JQC75_04610
Help
Entry
JQC75_04610 CDS
T07182
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_04610 (truB)
Enzymes [BR:
slit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JQC75_04610 (truB)
Transfer RNA biogenesis [BR:
slit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JQC75_04610 (truB)
Prokaryotic type
JQC75_04610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QRH02708
LinkDB
All DBs
Position
1038167..1039114
Genome browser
AA seq
315 aa
AA seq
DB search
MARRTKGRNIDGIVLLDKPTGMSSNHALQRVKRIYNASKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGDVVSERPMNFTPEQLDVALDSFRGDTLQ
VPSMFSALKYQGQPLYKYAREGKEVPREARPITVFELNFIKLEGDELTLDIHCSKGTYIR
TIIDDLGEKLGCGAHVIMLRRTAVAGYPYERMVTIEALEALLAQAEQEGVEPKTLLDPLL
LPMDTAVADFPEVNIPDAVAPYLMNGNPVRVAGVSSDSLMRITLGEARRFVGVGAINDDG
LLAPKRLVVFYDDEA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcaccaaagggcgcaatatcgacggtatcgtcctgctggataaacccacg
ggcatgagttccaaccatgccctgcagcgggttaagcgcatttacaatgcgtctaaagcc
ggacatacgggggcgctcgatcccttggcaaccggcatgctgccggtgtgtttgggtgaa
gcaaccaagttttcccagcacctgctggatgcggacaagcgctatctggttaccgccaaa
cttggccagcgtaccgacaccagtgattctgacggtgacgtggtcagcgaaagacccatg
aatttcaccccggagcaactggatgtcgccctggacagtttccggggagataccctgcag
gtaccttctatgttttcggcgctcaagtatcagggccaacccctgtacaagtacgcccgt
gaaggcaaagaagtaccccgcgaagcccggcccatcacagtgtttgagctgaactttatc
aagcttgaaggcgatgagctgacactggatatccactgctccaagggcacttacatccgt
accatcattgatgatttgggtgaaaagctgggttgtggtgcccacgtgattatgctcaga
cgcacagccgtcgcaggttatccctacgagcgtatggtgaccatagaagcactggaagcc
ttgttggctcaggcagagcaagagggcgtcgagccaaaaaccttgctcgacccgctgctg
ctgcccatggataccgctgtggccgattttccggaagtgaatattccggatgcggttgct
ccgtatctgatgaacggtaaccctgtgcgcgtcgcaggtgtgtccagcgacagcctgatg
cgcattacccttggggaagcgcgacggttcgttggtgtgggtgccatcaatgacgatggc
ctgctggcgcccaaacgcctggttgtcttttatgatgatgaagcctaa
DBGET
integrated database retrieval system
