Shewanella litorisediminis: JQC75_04660
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Entry
JQC75_04660 CDS
T07182
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00240
Pyrimidine metabolism
slit01100
Metabolic pathways
slit01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JQC75_04660 (deoA)
Enzymes [BR:
slit01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
JQC75_04660 (deoA)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
DUF7204
Motif
Other DBs
NCBI-ProteinID:
QRH02718
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Position
1051597..1052928
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AA seq
443 aa
AA seq
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MFLAQEIIRKKRNAEALSKEEIQFFVKGITDNSVSEGQIAALGMAVYFNDMTMDERIALT
TAMRDSGTVLNWDSLGLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHT
GGTLDKFDAIPGYQTEPSSELFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESI
SLITASILSKKLAAGLDALAMDVKVGSGAFMPTYEASLELARSITAVANGAGTKTTALLT
DMNQVLASCAGNALEVKEAVDFLTGKYRNPRLYEVTMGLCAEMLVLGGLAANEVEARTKL
NAVLDNGRAAEIFGKMVSGLGGPADFVESYDKYLPKASIVRPVYAERDGFAYSMVTRELG
LAVVTLGGGRRKPGDALDYSVGLSNVCALGQTINQDTPLAVIHAQSEAAFEEAAKAVRGA
ITISDKQPEKTPEIYQYVRAEDL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggcacaagagattattcgcaaaaaacgcaacgcagaggccctcagcaaagaa
gaaattcaattcttcgtgaaggggattaccgacaacagcgtatccgaaggacagattgcc
gcgctgggtatggcggtatatttcaacgacatgaccatggacgagcgtatcgcgctgacc
acggccatgcgtgattcaggcacagtgctcaactgggatagcctgggtttgaatggccct
gttatcgacaagcacagcactggtggtgtgggcgatgtgatttcgctgatgctcggcccc
atggccgccgcctgtggtggctatgtacccatgatttcaggccgtggccttggtcatacc
ggtggcaccctggataagtttgatgccatccccggttatcaaaccgagccgtccagcgaa
ctgttccgcaaagtggtaaaagaagccggtgtagccatcataggccaaaccggcgatctg
gtacctgccgataagcgtttctattccattcgtgacaacacggccactgtggagtccatt
tccctgattaccgcatcgattctgtcgaagaagctggcagctggcctggatgcgctcgcg
atggacgtcaaggtaggcagtggcgcctttatgccgacctacgaagcctcactggaactg
gctcgctccattaccgccgtggccaatggtgccggcaccaagaccacagcactgctcacc
gacatgaaccaggtactggcgtcctgtgccggtaacgcgctggaagtgaaagaagcggtg
gatttcctgaccggtaagtaccgcaatcctcgcctctatgaagtcaccatgggcctgtgc
gctgagatgttggtgcttggcggcctggcggccaatgaagttgaggcccgtaccaaactc
aatgctgtgctcgataacggccgtgccgcggagattttcggcaagatggtatcgggtttg
ggtggtcctgctgactttgttgaaagctacgataaatacctgcccaaggcttccattgtg
cgccccgtgtacgcagaacgtgacggctttgcctatagtatggtgacccgagagctgggc
cttgccgtagtgacattgggcggtggtcgtcgtaagcccggtgatgcgctggattacagc
gtgggcttatccaatgtgtgcgcactgggtcagaccatcaaccaagacacgccgcttgcc
gtaatccacgcacagtcggaggccgcgttcgaagaagctgccaaggcagtacgtggcgcg
atcacgataagcgataagcaacctgagaaaacacctgagatctaccagtacgtacgtgct
gaagatctgtaa
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